Parental gene: | LSM5, ENSTSYG00000006449 |
| Aliases: | None |
| Description: | LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17162] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_1802:6736..10689(-) |
>ENSTSYG00000006449
ATGGCGGCTAACGCTACTACCAACCCGTCGCAGCTGCTACCGCTAGAGCTCGTAGACAAATGTATAGGATCAAGAATTCA
CATCGTGATGAAGAGTGATAAGGAAATTGTTGGTACTCTTCTAGGATTTGATGACTTTGTCAATATGGTACTGGAAGATG
TCACTGAGTTTGAAATCACACCAGAAGGAAGAAGGATTACTAAATTAGATCAGATTTTGCTGAATGGAAATAATATAACA
ATGCTGGTTCCTGGAGGAGAAGGACCCGAAGTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005335 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009185 | possible_ortholog | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008121 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018068 | ortholog_one2many | 8 retrogenes | |
| Pongo abelii | ENSPPYG00000017661 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000042126 | possible_ortholog | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012662 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_96 | 68.13 | 100.00 | Please wait, loading  |
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| 2. | retro_tsyr_181 | 94.12 | 73.63 | Please wait, loading |
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| 3. | retro_tsyr_577 | 73.33 | 81.32 | Please wait, loading |
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| 4. | retro_tsyr_1022 | 68.42 | 100.00 | Please wait, loading |
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| 5. | retro_tsyr_1080 | 88.37 | 93.41 | Please wait, loading |
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| 6. | retro_tsyr_1579 | 84.62 | 100.00 | Please wait, loading |
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| 7. | retro_tsyr_1837 | 52.73 | 59.34 | Please wait, loading |
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| 8. | retro_tsyr_1863 | 94.12 | 73.63 | Please wait, loading |
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| 9. | retro_tsyr_1963 | 90.22 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSTSYG00000006449 retrocopies