RetrogeneDB - Parental gene ENSTSYG00000013988 details

							
>ENSTSYG00000013988
ATGAGCTCCCAGGTTCGCCAGAATTATTCCACCGAGGTTGAGGCAGCCGTCAACCGCCTGGTCAATTTGCATCTGCGGGC

CTCTTACACCTACCTCTCTCTGGGCTTCTATTTCGACCGCGACGATGTGGCTCTGGAAGGCGTGGGCCACTTCTTCCGCG

AATTGGCGGAGGAGAAACACGAGGGCGCCGAGCGTCTCTTGAAGTTACAAAACCAGCGTGGCGGCCGCGCCCTCTTCCAG

GATATCCAGAAGCCCTCTCAAGATGAGTGGGGTAAAACCCTGGATGCTATGGAAGCCGCCATGGCCTTAGAGAAGAGCCT

GAACCAAGCCCTTTTGGACCTTCATGCCCTGGGATCCACAGACCCCCATCTCTGTGACTTCCTGGAGAACCACTTCCTAG

ATGAGGAGGTGAAACTCATCAAGAAGATGGGTGACCACCTGACCAACCTTCGCAGGCTGACCCAGCCTGAGTCTGGGCTG

GGCGAGTATCTCTTCGAAAGGCTCACCCTCAAGCACGACTAG

Species	Parental gene accession	Homology type	Retrogenes number
Bos taurus	ENSBTAG00000013343	ortholog_one2many	33 retrogenes	retro_btau_1007, retro_btau_1011, retro_btau_1033, retro_btau_1197, retro_btau_1209, retro_btau_1277, retro_btau_1354, retro_btau_1396, retro_btau_1452, retro_btau_1464, retro_btau_1466, retro_btau_1481, retro_btau_1511, retro_btau_1540, retro_btau_1561, retro_btau_1683, retro_btau_1781, retro_btau_1798, retro_btau_1848, retro_btau_250, retro_btau_301, retro_btau_339, retro_btau_340, retro_btau_419, retro_btau_422, retro_btau_520, retro_btau_597, retro_btau_639, retro_btau_649, retro_btau_938, retro_btau_963, retro_btau_993, retro_btau_998,
Canis familiaris	ENSCAFG00000003861	possible_ortholog	1 retrogene	retro_cfam_203,
Callithrix jacchus	ENSCJAG00000000250	possible_ortholog	13 retrogenes	retro_cjac_1171, retro_cjac_1208, retro_cjac_1264, retro_cjac_1643, retro_cjac_2272, retro_cjac_2780, retro_cjac_3113, retro_cjac_3254, retro_cjac_3879, retro_cjac_556, retro_cjac_60, retro_cjac_889, retro_cjac_997,
Cavia porcellus	ENSCPOG00000020558	possible_ortholog	1 retrogene	retro_cpor_100,
Dasypus novemcinctus	ENSDNOG00000002455	possible_ortholog	9 retrogenes	retro_dnov_1096, retro_dnov_1135, retro_dnov_1177, retro_dnov_1737, retro_dnov_2006, retro_dnov_2352, retro_dnov_2678, retro_dnov_473, retro_dnov_993,
Dasypus novemcinctus	ENSDNOG00000004126	possible_ortholog	5 retrogenes	retro_dnov_1263, retro_dnov_1490, retro_dnov_1760, retro_dnov_2329, retro_dnov_299,
Dasypus novemcinctus	ENSDNOG00000005577	possible_ortholog	36 retrogenes	retro_dnov_103, retro_dnov_1164, retro_dnov_1215, retro_dnov_130, retro_dnov_1382, retro_dnov_1441, retro_dnov_1515, retro_dnov_1568, retro_dnov_1657, retro_dnov_1812, retro_dnov_1815, retro_dnov_1918, retro_dnov_1991, retro_dnov_2014, retro_dnov_2134, retro_dnov_2187, retro_dnov_236, retro_dnov_2376, retro_dnov_2379, retro_dnov_247, retro_dnov_2575, retro_dnov_2658, retro_dnov_2667, retro_dnov_285, retro_dnov_305, retro_dnov_432, retro_dnov_439, retro_dnov_543, retro_dnov_598, retro_dnov_642, retro_dnov_807, retro_dnov_841, retro_dnov_846, retro_dnov_849, retro_dnov_861, retro_dnov_897,
Dasypus novemcinctus	ENSDNOG00000007848	possible_ortholog	2 retrogenes	retro_dnov_1049, retro_dnov_1476,
Dasypus novemcinctus	ENSDNOG00000016683	possible_ortholog	8 retrogenes	retro_dnov_1134, retro_dnov_1329, retro_dnov_2023, retro_dnov_2194, retro_dnov_2228, retro_dnov_56, retro_dnov_757, retro_dnov_886,
Dipodomys ordii	ENSDORG00000015550	ortholog_one2one	5 retrogenes	retro_dord_222, retro_dord_34, retro_dord_618, retro_dord_776, retro_dord_79,
Felis catus	ENSFCAG00000003348	ortholog_one2many	37 retrogenes	retro_fcat_101, retro_fcat_1029, retro_fcat_1040, retro_fcat_1059, retro_fcat_1141, retro_fcat_1150, retro_fcat_1295, retro_fcat_1319, retro_fcat_1336, retro_fcat_1359, retro_fcat_139, retro_fcat_1522, retro_fcat_1523, retro_fcat_1602, retro_fcat_1658, retro_fcat_1741, retro_fcat_1747, retro_fcat_1764, retro_fcat_1765, retro_fcat_1766, retro_fcat_1799, retro_fcat_1812, retro_fcat_1901, retro_fcat_297, retro_fcat_298, retro_fcat_315, retro_fcat_343, retro_fcat_50, retro_fcat_533, retro_fcat_536, retro_fcat_620, retro_fcat_675, retro_fcat_68, retro_fcat_778, retro_fcat_918, retro_fcat_927, retro_fcat_964,
Gorilla gorilla	ENSGGOG00000011999	possible_ortholog	9 retrogenes	retro_ggor_128, retro_ggor_1547, retro_ggor_2039, retro_ggor_25, retro_ggor_2784, retro_ggor_2894, retro_ggor_420, retro_ggor_677, retro_ggor_750,
Loxodonta africana	ENSLAFG00000031248	possible_ortholog	11 retrogenes	retro_lafr_1003, retro_lafr_1064, retro_lafr_1065, retro_lafr_1069, retro_lafr_1206, retro_lafr_255, retro_lafr_345, retro_lafr_346, retro_lafr_785, retro_lafr_836, retro_lafr_977,
Microcebus murinus	ENSMICG00000001861	ortholog_one2one	7 retrogenes	retro_mmur_1017, retro_mmur_1238, retro_mmur_1420, retro_mmur_1506, retro_mmur_204, retro_mmur_214, retro_mmur_681,
Macaca mulatta	ENSMMUG00000003909	possible_ortholog	9 retrogenes	retro_mmul_1051, retro_mmul_1125, retro_mmul_1508, retro_mmul_1569, retro_mmul_1617, retro_mmul_1950, retro_mmul_481, retro_mmul_518, retro_mmul_989,
Mustela putorius furo	ENSMPUG00000003304	possible_ortholog	29 retrogenes	retro_mputfur_1012, retro_mputfur_1026, retro_mputfur_1133, retro_mputfur_1142, retro_mputfur_1150, retro_mputfur_1216, retro_mputfur_1222, retro_mputfur_1225, retro_mputfur_1238, retro_mputfur_1246, retro_mputfur_1268, retro_mputfur_1303, retro_mputfur_1335, retro_mputfur_1521, retro_mputfur_1620, retro_mputfur_195, retro_mputfur_222, retro_mputfur_265, retro_mputfur_350, retro_mputfur_356, retro_mputfur_368, retro_mputfur_482, retro_mputfur_66, retro_mputfur_702, retro_mputfur_741, retro_mputfur_80, retro_mputfur_820, retro_mputfur_906, retro_mputfur_952,
Mus musculus	ENSMUSG00000050708	possible_ortholog	1 retrogene	retro_mmus_228,
Oryctolagus cuniculus	ENSOCUG00000000014	possible_ortholog	6 retrogenes	retro_ocun_1090, retro_ocun_1627, retro_ocun_223, retro_ocun_357, retro_ocun_530, retro_ocun_982,
Pan troglodytes	ENSPTRG00000011268	possible_ortholog	11 retrogenes	retro_ptro_1118, retro_ptro_1307, retro_ptro_1437, retro_ptro_2055, retro_ptro_2619, retro_ptro_2818, retro_ptro_3101, retro_ptro_3195, retro_ptro_328, retro_ptro_645, retro_ptro_98,
Pteropus vampyrus	ENSPVAG00000009570	ortholog_one2one	25 retrogenes	retro_pvam_1054, retro_pvam_1076, retro_pvam_1205, retro_pvam_1228, retro_pvam_1241, retro_pvam_1270, retro_pvam_1276, retro_pvam_1311, retro_pvam_1383, retro_pvam_1385, retro_pvam_1471, retro_pvam_1479, retro_pvam_229, retro_pvam_29, retro_pvam_314, retro_pvam_322, retro_pvam_377, retro_pvam_41, retro_pvam_447, retro_pvam_47, retro_pvam_491, retro_pvam_519, retro_pvam_542, retro_pvam_677, retro_pvam_959,
Rattus norvegicus	ENSRNOG00000020843	possible_ortholog	7 retrogenes	retro_rnor_109, retro_rnor_168, retro_rnor_263, retro_rnor_306, retro_rnor_362, retro_rnor_373, retro_rnor_4,
Sorex araneus	ENSSARG00000011741	ortholog_one2one	12 retrogenes	retro_sara_264, retro_sara_315, retro_sara_359, retro_sara_384, retro_sara_404, retro_sara_408, retro_sara_476, retro_sara_486, retro_sara_506, retro_sara_634, retro_sara_728, retro_sara_87,
Sus scrofa	ENSSSCG00000003153	ortholog_one2many	33 retrogenes	retro_sscr_1040, retro_sscr_1095, retro_sscr_1101, retro_sscr_1142, retro_sscr_1189, retro_sscr_1214, retro_sscr_1215, retro_sscr_124, retro_sscr_197, retro_sscr_212, retro_sscr_224, retro_sscr_305, retro_sscr_331, retro_sscr_400, retro_sscr_531, retro_sscr_532, retro_sscr_533, retro_sscr_534, retro_sscr_535, retro_sscr_536, retro_sscr_559, retro_sscr_589, retro_sscr_605, retro_sscr_74, retro_sscr_747, retro_sscr_799, retro_sscr_817, retro_sscr_830, retro_sscr_833, retro_sscr_839, retro_sscr_840, retro_sscr_862, retro_sscr_898,
Ictidomys tridecemlineatus	ENSSTOG00000020639	ortholog_one2many	7 retrogenes	retro_itri_1606, retro_itri_1701, retro_itri_1857, retro_itri_24, retro_itri_355, retro_itri_719, retro_itri_741,
Tursiops truncatus	ENSTTRG00000001252	ortholog_one2one	66 retrogenes	retro_ttru_1000, retro_ttru_1071, retro_ttru_108, retro_ttru_1092, retro_ttru_1121, retro_ttru_1134, retro_ttru_1191, retro_ttru_1197, retro_ttru_1208, retro_ttru_1214, retro_ttru_1230, retro_ttru_1234, retro_ttru_1243, retro_ttru_1258, retro_ttru_1259, retro_ttru_1260, retro_ttru_1280, retro_ttru_1284, retro_ttru_1313, retro_ttru_1327, retro_ttru_1352, retro_ttru_146, retro_ttru_1460, retro_ttru_1461, retro_ttru_1487, retro_ttru_1489, retro_ttru_1517, retro_ttru_1547, retro_ttru_1574, retro_ttru_1590, retro_ttru_1636, retro_ttru_1642, retro_ttru_1657, retro_ttru_1675, retro_ttru_1688, retro_ttru_1728, retro_ttru_1751, retro_ttru_1753, retro_ttru_1761, retro_ttru_1791, retro_ttru_1805, retro_ttru_1842, retro_ttru_1870, retro_ttru_1936, retro_ttru_201, retro_ttru_320, retro_ttru_321, retro_ttru_343, retro_ttru_346, retro_ttru_39, retro_ttru_452, retro_ttru_525, retro_ttru_665, retro_ttru_743, retro_ttru_753, retro_ttru_759, retro_ttru_797, retro_ttru_811, retro_ttru_823, retro_ttru_835, retro_ttru_847, retro_ttru_877, retro_ttru_895, retro_ttru_939, retro_ttru_943, retro_ttru_960,
Vicugna pacos	ENSVPAG00000005509	ortholog_one2one	3 retrogenes	retro_vpac_119, retro_vpac_206, retro_vpac_258,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_tsyr_43	89.43	70.52	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_tsyr_65	70.37	61.85	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_tsyr_106	78.98	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_tsyr_135	85.55	99.42	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_tsyr_160	83.72	99.42	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_tsyr_228	78.16	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_tsyr_233	81.37	56.65	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_tsyr_301	84.43	69.36	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_tsyr_341	75.57	100.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_tsyr_353	82.76	66.47	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_tsyr_354	81.82	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_tsyr_435	65.59	52.02	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_tsyr_441	65.64	91.91	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_tsyr_489	71.31	68.79	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_tsyr_509	78.74	100.00	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_tsyr_517	53.21	61.85	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_tsyr_618	75.28	99.42	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_tsyr_648	72.19	86.13	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_tsyr_661	64.10	66.47	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_tsyr_663	96.57	100.00	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_tsyr_729	85.45	63.01	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_tsyr_758	67.61	100.00	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_tsyr_777	77.78	51.45	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_tsyr_861	52.48	56.65	Please wait, loading	Please wait, loading	Please wait, loading
25.	retro_tsyr_925	85.55	100.00	Please wait, loading	Please wait, loading	Please wait, loading
26.	retro_tsyr_932	67.89	61.85	Please wait, loading	Please wait, loading	Please wait, loading
27.	retro_tsyr_945	89.20	100.00	Please wait, loading	Please wait, loading	Please wait, loading
28.	retro_tsyr_947	70.69	100.00	Please wait, loading	Please wait, loading	Please wait, loading
29.	retro_tsyr_962	76.92	73.99	Please wait, loading	Please wait, loading	Please wait, loading
30.	retro_tsyr_964	93.64	100.00	Please wait, loading	Please wait, loading	Please wait, loading
31.	retro_tsyr_1035	79.87	88.44	Please wait, loading	Please wait, loading	Please wait, loading
32.	retro_tsyr_1059	79.87	88.44	Please wait, loading	Please wait, loading	Please wait, loading
33.	retro_tsyr_1111	77.98	61.27	Please wait, loading	Please wait, loading	Please wait, loading
34.	retro_tsyr_1131	84.43	69.36	Please wait, loading	Please wait, loading	Please wait, loading
35.	retro_tsyr_1139	76.57	100.00	Please wait, loading	Please wait, loading	Please wait, loading
36.	retro_tsyr_1194	70.59	95.95	Please wait, loading	Please wait, loading	Please wait, loading
37.	retro_tsyr_1228	63.76	84.39	Please wait, loading	Please wait, loading	Please wait, loading
38.	retro_tsyr_1241	81.25	54.91	Please wait, loading	Please wait, loading	Please wait, loading
39.	retro_tsyr_1248	61.43	79.77	Please wait, loading	Please wait, loading	Please wait, loading
40.	retro_tsyr_1306	85.63	100.00	Please wait, loading	Please wait, loading	Please wait, loading
41.	retro_tsyr_1315	81.66	96.53	Please wait, loading	Please wait, loading	Please wait, loading
42.	retro_tsyr_1334	96.34	94.80	Please wait, loading	Please wait, loading	Please wait, loading
43.	retro_tsyr_1348	91.38	100.00	Please wait, loading	Please wait, loading	Please wait, loading
44.	retro_tsyr_1362	79.41	96.53	Please wait, loading	Please wait, loading	Please wait, loading
45.	retro_tsyr_1372	68.15	75.14	Please wait, loading	Please wait, loading	Please wait, loading
46.	retro_tsyr_1716	70.59	55.49	Please wait, loading	Please wait, loading	Please wait, loading
47.	retro_tsyr_1794	61.36	100.00	Please wait, loading	Please wait, loading	Please wait, loading
48.	retro_tsyr_1828	89.66	67.05	Please wait, loading	Please wait, loading	Please wait, loading
49.	retro_tsyr_1841	74.72	100.00	Please wait, loading	Please wait, loading	Please wait, loading
50.	retro_tsyr_1846	73.08	88.44	Please wait, loading	Please wait, loading	Please wait, loading
51.	retro_tsyr_1885	85.96	65.90	Please wait, loading	Please wait, loading	Please wait, loading
52.	retro_tsyr_1975	73.68	64.16	Please wait, loading	Please wait, loading	Please wait, loading
53.	retro_tsyr_1992	83.19	68.79	Please wait, loading	Please wait, loading	Please wait, loading
54.	retro_tsyr_2009	77.61	76.88	Please wait, loading	Please wait, loading	Please wait, loading
55.	retro_tsyr_2046	95.42	75.72	Please wait, loading	Please wait, loading	Please wait, loading
56.	retro_tsyr_2055	86.93	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSTSYG00000013988 retrocopies

Parental gene:	FTL, ENSTSYG00000013988
Aliases:	None
Description:	ferritin, light polypeptide [Source:HGNC Symbol;Acc:3999]
Organism:	*Tarsier (Tarsius syrichta)*
Coordinates:	scaffold_131349:3666..4830(-)

Parental gene:

FTL, ENSTSYG00000013988