Parental gene:

ENSMPUG00000003304

Aliases:None
Description:None
Organism:Ferret (Mustela putorius furo)
Coordinates:GL897027.1:1808206..1812435(-)


>ENSMPUG00000003304
ATGAGCTCCCAGATTCGTCAGAATTATTCCACCGAGGTGGAGGCCGCCGTCAACCGTCTGGTCAACATGCATCTGCGGGC
CTCCTACACCTACCTCTCTCTGGGCTTCTATTTCGACCGTGACGATGTGGCTCTGGAAGGTGTGGGGCACTTCTTCCGCG
AGTTGGCTGAGGAGAAGCGCGAGGGTGCCGAGCGTCTCTTGAAGATGCAAAACCAGCGCGGCGGCCGCGCCCTCTTCCAG
GACGTCCAGAAGCCGTCCCAAGATGAGTGGGGGAAAACCCTGGACGCCATGGAAGCTGCCCTGGTTCTGGAGAAGAGCCT
GAACCAGGCTCTTCTGGATCTGCACGCCCTGGGTTCTGCCCGCACAGACCCCCATCTCTGTGACTTCCTGGAGAACCACT
TCCTGGACGAGGAGGTGAAGCTCATCAAGAAGATGGGCGACCACCTGACGAACCTCCGCAGGCTGGCCGGCCCCCAGGCT
GGGCTGGGCGAGTATCTCTTCGAGAGGCTCACCCTCAAGCACGACTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014582 ortholog_one2one 27 retrogenes
Bos taurus ENSBTAG00000013343 possible_ortholog 33 retrogenes
Canis familiaris ENSCAFG00000003861 ortholog_one2many 1 retrogene
Callithrix jacchus ENSCJAG00000000250 possible_ortholog 13 retrogenes
Cavia porcellus ENSCPOG00000020558 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000002455 possible_ortholog 9 retrogenes
Dasypus novemcinctus ENSDNOG00000004126 possible_ortholog 5 retrogenes
Dasypus novemcinctus ENSDNOG00000005577 possible_ortholog 36 retrogenes
Dasypus novemcinctus ENSDNOG00000007848 possible_ortholog 2 retrogenes
Dasypus novemcinctus ENSDNOG00000016683 possible_ortholog 8 retrogenes
Dipodomys ordii ENSDORG00000015550 possible_ortholog 5 retrogenes
Felis catus ENSFCAG00000003348 possible_ortholog 37 retrogenes
Homo sapiens ENSG00000087086 possible_ortholog 11 retrogenes
Gorilla gorilla ENSGGOG00000011999 possible_ortholog 9 retrogenes
Loxodonta africana ENSLAFG00000031248 possible_ortholog 11 retrogenes
Microcebus murinus ENSMICG00000001861 possible_ortholog 7 retrogenes
Macaca mulatta ENSMMUG00000003909 possible_ortholog 9 retrogenes
Mustela putorius furo ENSMPUG00000014030 other_paralog 3 retrogenes
Mus musculus ENSMUSG00000050708 possible_ortholog 1 retrogene
Nomascus leucogenys ENSNLEG00000004716 possible_ortholog 10 retrogenes
Oryctolagus cuniculus ENSOCUG00000000014 possible_ortholog 6 retrogenes
Ochotona princeps ENSOPRG00000002492 possible_ortholog 10 retrogenes
Procavia capensis ENSPCAG00000013227 possible_ortholog 6 retrogenes
Pongo abelii ENSPPYG00000010223 possible_ortholog 11 retrogenes
Pan troglodytes ENSPTRG00000011268 possible_ortholog 11 retrogenes
Pteropus vampyrus ENSPVAG00000009570 possible_ortholog 25 retrogenes
Rattus norvegicus ENSRNOG00000020843 possible_ortholog 7 retrogenes
Sorex araneus ENSSARG00000011741 possible_ortholog 12 retrogenes
Sus scrofa ENSSSCG00000003153 possible_ortholog 33 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020639 possible_ortholog 7 retrogenes
Tupaia belangeri ENSTBEG00000005311 possible_ortholog 13 retrogenes
Tarsius syrichta ENSTSYG00000013988 possible_ortholog 56 retrogenes
Tursiops truncatus ENSTTRG00000001252 possible_ortholog 66 retrogenes
Vicugna pacos ENSVPAG00000005509 possible_ortholog 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mputfur_66 65.71 100.00
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2. retro_mputfur_80 76.57 100.00
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3. retro_mputfur_195 75.16 89.71
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4. retro_mputfur_222 54.95 62.29
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5. retro_mputfur_265 59.32 66.29
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6. retro_mputfur_350 53.52 77.71
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7. retro_mputfur_356 55.83 67.43
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8. retro_mputfur_368 52.55 75.43
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9. retro_mputfur_482 61.82 62.29
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10. retro_mputfur_702 73.14 100.00
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11. retro_mputfur_741 51.35 61.14
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12. retro_mputfur_820 52.31 70.29
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13. retro_mputfur_906 65.09 59.43
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14. retro_mputfur_952 62.78 100.00
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15. retro_mputfur_1012 69.72 80.00
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16. retro_mputfur_1026 59.26 60.57
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17. retro_mputfur_1133 93.02 97.14
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18. retro_mputfur_1142 68.75 53.71
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19. retro_mputfur_1150 57.14 53.71
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20. retro_mputfur_1216 57.76 64.57
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21. retro_mputfur_1222 64.44 76.00
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22. retro_mputfur_1225 71.55 65.14
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23. retro_mputfur_1238 59.81 60.00
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24. retro_mputfur_1246 50.72 77.71
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25. retro_mputfur_1268 65.77 62.29
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26. retro_mputfur_1303 67.24 96.00
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27. retro_mputfur_1335 60.69 96.00
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28. retro_mputfur_1521 61.82 61.71
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29. retro_mputfur_1620 57.80 61.71
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Download FASTA sequences of all ENSMPUG00000003304 retrocopies