Parental gene:

FTL1, ENSRNOG00000020843

Aliases:Ftl1, Ftl
Description:Ferritin light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P02793]
Organism:Rat (Rattus norvegicus)
Coordinates:1:102527140..102528775(-)


>ENSRNOG00000020843
ATGACCTCTCAGATTCGTCAGAATTATTCCACCGAAGTGGAAGCTGCCGTGAACCGCCTGGTCAACTTGCACCTGCGGGC
CTCTTACACCTACCTCTCTCTGGGCTTCTTTTTTGATCGGGATGACGTGGCTTTGGAAGGCGTAGGCCACTTCTTCCGCG
AATTGGCCGAGGAGAAGCGCGAGGGCGCCGAGCGTCTCCTCAAGTTGCAGAACGAACGCGGGGGCCGTGCACTCTTCCAG
GATGTGCAGAAGCCATCTCAAGATGAGTGGGGTAAAACCCTGGAGGCCATGGAAGCTGCCTTGGCCCTGGAGAAGAACCT
GAACCAGGCCCTCTTGGATCTGCACGCCCTGGGCTCTGCCCGCACAGACCCTCACCTCTGTGACTTCTTGGAAAGCCACT
TCCTGGATAAGGAGGTGAAGCTCATCAAGAAGATGGGCAACCACCTGACCAACCTCCGTAGGGTGGCAGGGCCACAACCA
GCGCAGACTGGCGTGGCCCAGGCATCTCTGGGCGAGTATCTCTTTGAGCGCCTCACTCTGAAGCACGACTAG

Library Parental gene expression (RPM)
SRP017611_liver 286 .43 RPM
SRP017611_kidney 598 .38 RPM
SRP017611_brain 62 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014582 possible_ortholog 27 retrogenes
Bos taurus ENSBTAG00000013343 possible_ortholog 33 retrogenes
Canis familiaris ENSCAFG00000003861 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000000250 possible_ortholog 13 retrogenes
Cavia porcellus ENSCPOG00000020558 possible_ortholog 1 retrogene
Dasypus novemcinctus ENSDNOG00000002455 possible_ortholog 9 retrogenes
Dasypus novemcinctus ENSDNOG00000004126 possible_ortholog 5 retrogenes
Dasypus novemcinctus ENSDNOG00000005577 possible_ortholog 36 retrogenes
Dasypus novemcinctus ENSDNOG00000007848 possible_ortholog 2 retrogenes
Dasypus novemcinctus ENSDNOG00000016683 possible_ortholog 8 retrogenes
Dipodomys ordii ENSDORG00000015550 possible_ortholog 5 retrogenes
Felis catus ENSFCAG00000003348 possible_ortholog 37 retrogenes
Homo sapiens ENSG00000087086 possible_ortholog 11 retrogenes
Gorilla gorilla ENSGGOG00000011999 possible_ortholog 9 retrogenes
Loxodonta africana ENSLAFG00000031248 possible_ortholog 11 retrogenes
Microcebus murinus ENSMICG00000001861 possible_ortholog 7 retrogenes
Macaca mulatta ENSMMUG00000003909 possible_ortholog 9 retrogenes
Mustela putorius furo ENSMPUG00000003304 possible_ortholog 29 retrogenes
Mus musculus ENSMUSG00000050708 ortholog_many2many 1 retrogene
Nomascus leucogenys ENSNLEG00000004716 possible_ortholog 10 retrogenes
Oryctolagus cuniculus ENSOCUG00000000014 ortholog_many2many 6 retrogenes
Ochotona princeps ENSOPRG00000002492 possible_ortholog 10 retrogenes
Procavia capensis ENSPCAG00000013227 possible_ortholog 6 retrogenes
Pongo abelii ENSPPYG00000010223 possible_ortholog 11 retrogenes
Pan troglodytes ENSPTRG00000011268 possible_ortholog 11 retrogenes
Pteropus vampyrus ENSPVAG00000009570 possible_ortholog 25 retrogenes
Rattus norvegicus ENSRNOG00000022619 other_paralog 9 retrogenes
Sorex araneus ENSSARG00000011741 possible_ortholog 12 retrogenes
Sus scrofa ENSSSCG00000003153 possible_ortholog 33 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020639 possible_ortholog 7 retrogenes
Tupaia belangeri ENSTBEG00000005311 possible_ortholog 13 retrogenes
Tarsius syrichta ENSTSYG00000013988 possible_ortholog 56 retrogenes
Tursiops truncatus ENSTTRG00000001252 possible_ortholog 66 retrogenes
Vicugna pacos ENSVPAG00000005509 possible_ortholog 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_4 100.00 100.00
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2. retro_rnor_109 96.70 99.45
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3. retro_rnor_168 98.91 100.00
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4. retro_rnor_263 97.81 100.00
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5. retro_rnor_306 98.91 100.00
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6. retro_rnor_362 98.91 100.00
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7. retro_rnor_373 96.72 100.00
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Download FASTA sequences of all ENSRNOG00000020843 retrocopies