RetrogeneDB ID: | retro_amel_216 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192355.1:3407855..3408176(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NME4 | ||
Ensembl ID: | ENSAMEG00000007077 | ||
Aliases: | None | ||
Description: | NME/NM23 nucleoside diphosphate kinase 4 [Source:HGNC Symbol;Acc:7852] |
Percent Identity: | 69.37 % |
Parental protein coverage: | 67.08 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | SKGGSSWTRERTLVAVKPDGVQRRLVGDVIQRFERRGFKLVGMKMLQA-PERVLAEHYHDLQRKPFYPA- |
S.GG.SWT.E.TLVAVKPDGVQR.L..D....FERRG.KL.G..MLQA..E..LAEH.HD.QRKPFYP.. | |
Retrocopy | SSGGPSWTQEWTLVAVKPDGVQR*LLADGFLSFERRGLKLTGRMMLQA<TENILAEHHHDRQRKPFYPT< |
Parental | LISYMTSGPVVAMVWEGPNVVCSSRAMIGHTDSAEAA-PGT |
LISY..SGPVVA.VW..PN.VC.SRAM.GHT..AEAA.PGT | |
Retrocopy | LISYVSSGPVVAVVWKDPNMVCTSRAMVGHTNPAEAA<PGT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |