RetrogeneDB ID: | retro_amel_807 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192652.1:1322868..1323117(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COX7B | ||
Ensembl ID: | ENSAMEG00000006153 | ||
Aliases: | None | ||
Description: | cytochrome c oxidase subunit VIIb [Source:HGNC Symbol;Acc:2291] |
Percent Identity: | 56.32 % |
Parental protein coverage: | 98.82 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | FSFRMFPMARTALSRLRVQSIPQTMA-RQSHQKR-TPDFHDKYGNAVLASGA-TFCIAVWAYTATQIGIE |
FS...FP.A..A.S.L..QSI.QT...RQSH....T.DFHDK..N..LASGA.TFC.AV...T....G.E | |
Retrocopy | FSLMVFPLAKNARSHLQIQSIRQTIQ<RQSHRSG<TSDFHDK*ENVLLASGA<TFCAAVQT*TEI*TGTE |
Parental | WNLSPVGRVTPKEWRDQ |
W.LSPVGRVT.K.W.D. | |
Retrocopy | WKLSPVGRVTLKQWKDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |