RetrogeneDB ID: | retro_chof_1285 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_250151:1462..1978(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL6 | ||
Ensembl ID: | ENSCHOG00000002917 | ||
Aliases: | None | ||
Description: | ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] |
Percent Identity: | 94.77 % |
Parental protein coverage: | 59.72 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAGEKAEKPATMEKKPEAKKADASGKVKKSSLKTKKPKKGKPHCSRNPVLVRGIGRYSRSAMYSTKAMYK |
M.GEKAEKPATMEKKPEAKKADASG.VKK.SLKTKKPKKGKPHCS.NPVLVRGIGRYSRSAMYS.KAMYK | |
Retrocopy | MVGEKAEKPATMEKKPEAKKADASGNVKKTSLKTKKPKKGKPHCSQNPVLVRGIGRYSRSAMYSRKAMYK |
Parental | RKYSAAKSRIEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKL |
RKYSAAKSRIEKKKKEKVLATVTKPVGGDKNGGTRVVK..KMPRYYPTEDVPRKLLSHG.KPFSQHVRKL | |
Retrocopy | RKYSAAKSRIEKKKKEKVLATVTKPVGGDKNGGTRVVKRCKMPRYYPTEDVPRKLLSHGRKPFSQHVRKL |
Parental | RSSITPGTVLIILTGRHRGKRVVFLKQLGSGL |
RSSITPGT.LIILTGRHRGKRVVFLKQLGSGL | |
Retrocopy | RSSITPGTILIILTGRHRGKRVVFLKQLGSGL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |