RetrogeneDB ID: | retro_chof_321 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_7312:59102..59588(+) | ||
Located in intron of: | ENSCHOG00000008951 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL6 | ||
Ensembl ID: | ENSCHOG00000002917 | ||
Aliases: | None | ||
Description: | ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] |
Percent Identity: | 82.32 % |
Parental protein coverage: | 56.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGL |
GTRVVKLRKMPRY.PTEDVP.KLLSHGKKP..QHVRKL.SSITP.T.LI.LTG..RGKR.VFLKQLGSGL | |
Retrocopy | GTRVVKLRKMPRYHPTEDVPLKLLSHGKKPLCQHVRKLQSSITPKTILIGLTGCYRGKRMVFLKQLGSGL |
Parental | LLVTGPLVLNRVPLRRAHQKFVIATSTKVDISSVKIPKHLTDAYFKKKKLHKPRHQEGEIFDTEKEKYEL |
LLVTG.LVLNRVPL.R.HQKFVIATSTK.DIS.VK.PKHLTDAYF..KKLHKPRHQEGEIFD.EK.KYE. | |
Retrocopy | LLVTGSLVLNRVPLHRTHQKFVIATSTKIDISGVKMPKHLTDAYF--KKLHKPRHQEGEIFDKEKKKYEF |
Parental | TEQRKVDQKTVDSQLMPKIKAVPQ |
TEQRK..QKTV.SQ..PKIKA.P. | |
Retrocopy | TEQRKFYQKTVGSQVTPKIKAIPR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |