RetrogeneDB ID: | retro_chof_2151 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_53573:195..684(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL6 | ||
Ensembl ID: | ENSCHOG00000002917 | ||
Aliases: | None | ||
Description: | ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] |
Percent Identity: | 79.88 % |
Parental protein coverage: | 58.68 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | DVPRKLLSHGKKPFSQHVRKLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLVLNRVPLRRA |
DVP.KLLSHGKKPFSQHVRKL.SSITPG.VLIILT.RHRGKR.VFLKQLG.G.LLVTGPLV.NRVPL.R. | |
Retrocopy | DVPQKLLSHGKKPFSQHVRKLQSSITPGMVLIILTSRHRGKRMVFLKQLGCGFLLVTGPLVFNRVPLHRT |
Parental | HQKFVIATSTKVDISSVKIPKHLTDAYFKKKKLHKPRHQEGEIFDTEKEKYELTEQRKVDQKTVDSQLMP |
HQKFVIAT.T..DIS.VKIP..LTDAY.KKKKLHK.RH.EGEIF.T.KEK.EL..Q.KVDQKTVDS.L.. | |
Retrocopy | HQKFVIAT-TEIDIS-VKIPQNLTDAYIKKKKLHKSRHKEGEIFNTQKEKHELIKQCKVDQKTVDSNLCQ |
Parental | KIKAVPQLQGYLRSVFSLTNGVYPHKLVF |
K.K....LQGYLRSVFSLTNGVYP.KLVF | |
Retrocopy | KSK----LQGYLRSVFSLTNGVYPPKLVF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |