RetrogeneDB ID: | retro_dord_20 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_781:63346..63607(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSDORG00000000877 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000007859 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.13 % |
Parental protein coverage: | 75.45 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | TEQALVRPRSRAVPPFVFTRRGSMFYDEDGDLAHEFYEETIITKNGQKRAKLRRVHKNLIPQGIVKLDPP |
TEQALVRPRSRAVPPF.F..RGS.FY.EDGDLAH.FYEETIIT.NGQ.RAKLRR..KNLIPQ...KLDPP | |
Retrocopy | TEQALVRPRSRAVPPFLFRHRGSIFYPEDGDLAHGFYEETIITENGQERAKLRRACKNLIPQDVLKLDPP |
Parental | RIHVDFPVILYEV |
RIHVDFPVIL.EV | |
Retrocopy | RIHVDFPVILFEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000007859 | 2 retrocopies |
retro_dord_20 , retro_dord_590,
|
Felis catus | ENSFCAG00000031595 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000002499 | 1 retrocopy | |
Mus musculus | ENSMUSG00000010054 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000005259 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000008080 | 3 retrocopies | |
Rattus norvegicus | ENSRNOG00000021528 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000010483 | 2 retrocopies | |
Vicugna pacos | ENSVPAG00000007903 | 1 retrocopy |