RetrogeneDB ID: | retro_ogar_2293 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873609.1:8009215..8009545(-) | ||
Located in intron of: | ENSOGAG00000007904 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TUSC2 | ||
Ensembl ID: | ENSOGAG00000008080 | ||
Aliases: | None | ||
Description: | tumor suppressor candidate 2 [Source:HGNC Symbol;Acc:17034] |
Percent Identity: | 100. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGASGSKARGLWPFASAAGASSPEAAAAEQALVRPRGRAVPPFVFTRRGSMFYDEDGDLAHEFYEETIVT |
MGASGSKARGLWPFASAAGASSPEAAAAEQALVRPRGRAVPPFVFTRRGSMFYDEDGDLAHEFYEETIVT | |
Retrocopy | MGASGSKARGLWPFASAAGASSPEAAAAEQALVRPRGRAVPPFVFTRRGSMFYDEDGDLAHEFYEETIVT |
Parental | KNGQKRAKLRRVHKNLIPQGIVKLDPPRIHVDFPVILYEV |
KNGQKRAKLRRVHKNLIPQGIVKLDPPRIHVDFPVILYEV | |
Retrocopy | KNGQKRAKLRRVHKNLIPQGIVKLDPPRIHVDFPVILYEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000007859 | 2 retrocopies | |
Felis catus | ENSFCAG00000031595 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000002499 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000008080 | 3 retrocopies |
retro_ogar_2293 , retro_ogar_2714, retro_ogar_3421,
|
Tarsius syrichta | ENSTSYG00000010483 | 2 retrocopies | |
Vicugna pacos | ENSVPAG00000007903 | 1 retrocopy |