RetrogeneDB ID: | retro_mluc_874 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429780:8479433..8479709(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000002442 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TUSC2 | ||
Ensembl ID: | ENSMLUG00000002499 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.74 % |
Parental protein coverage: | 83.64 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GGGGPEAAAAEQALVRPRGRVVPPFVFTRRGSMFYDEDGDLAHEFYEETIVTKNGQKRAKLRRVHKNLIP |
GGGG............P.......FVFT.RGSMFYDEDGDL.HEFYEETIVTKNGQKRAKLRRVHKNL.. | |
Retrocopy | GGGGAGFCESARPSLAPPPHHHARFVFTCRGSMFYDEDGDLPHEFYEETIVTKNGQKRAKLRRVHKNLTL |
Parental | QGTVKLDTPRIHVDFPVILYEV |
QGTVKLDT...HVDFPVILYEV | |
Retrocopy | QGTVKLDTRCVHVDFPVILYEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000007859 | 2 retrocopies | |
Felis catus | ENSFCAG00000031595 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000002499 | 1 retrocopy |
retro_mluc_874 ,
|
Otolemur garnettii | ENSOGAG00000008080 | 3 retrocopies | |
Tarsius syrichta | ENSTSYG00000010483 | 2 retrocopies | |
Vicugna pacos | ENSVPAG00000007903 | 1 retrocopy |