RetrogeneDB ID: | retro_etel_19 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_179173:6083..6617(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000012151 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MCTS1 | ||
Ensembl ID: | ENSETEG00000015462 | ||
Aliases: | None | ||
Description: | malignant T cell amplified sequence 1 [Source:HGNC Symbol;Acc:23357] |
Percent Identity: | 93.22 % |
Parental protein coverage: | 97.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | FDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQR |
F.EKENVSNCIQLKTSV.K.IKNQLIEQF.GIEPWLNQIMPKKDPVKI.RCHEHIEILTVNGELLFFRQR | |
Retrocopy | FNEKENVSNCIQLKTSVMKNIKNQLIEQFSGIEPWLNQIMPKKDPVKIIRCHEHIEILTVNGELLFFRQR |
Parental | EGPFYPTLRLLHKXXFILPHQQVDKGAMEFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMAEGKQHALC |
EGPFYPTLRLLHK..FILPHQQVDKGA..FVLSGA.IMCPGLTSPGAKLYPAAVDTIVA.MAEGKQHALC | |
Retrocopy | EGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGASIMCPGLTSPGAKLYPAAVDTIVAVMAEGKQHALC |
Parental | VGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTYK |
VGVMKM.AEDIEKVNKGIGIENIHYLNDGLWHMKTYK | |
Retrocopy | VGVMKMNAEDIEKVNKGIGIENIHYLNDGLWHMKTYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |