RetrogeneDB ID: | retro_etel_1925 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_314802:8358..8639(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUTF2 | ||
Ensembl ID: | ENSETEG00000016354 | ||
Aliases: | None | ||
Description: | nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722] |
Percent Identity: | 73.47 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | IDAS---CLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITSQDHQPTPDSCILSMV-VGQLKADEDPIMGF |
IDAS...CLTWE.QQ.QGKA.IV...SSLPF.KIQHS.T.QDHQPTP.SCILS.V.VGQLKADEDPI.GF | |
Retrocopy | IDASYMRCLTWERQQLQGKADIV---SSLPF*KIQHSMTPQDHQPTPESCILSKV<VGQLKADEDPILGF |
Parental | HQMFLLKNINDAWVCTNDMFRLALHNFG |
HQ.F.L...NDA..CTNDM.RLAL..FG | |
Retrocopy | HQLFFLRHTNDACICTNDMVRLALPDFG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |