RetrogeneDB ID: | retro_shar_274 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL841167.1:54976..55208(-) | ||
Located in intron of: | ENSSHAG00000001950 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUTF2 | ||
Ensembl ID: | ENSSHAG00000006100 | ||
Aliases: | None | ||
Description: | nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722] |
Percent Identity: | 65.38 % |
Parental protein coverage: | 60.63 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | VQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITA-QDHQPTPDSCILS |
VQ.YY.LFD...TQLG.IYI..SCLT.E.Q.FQGK....EKLS.LPFQKI.HSI.A....Q...DS.ILS | |
Retrocopy | VQVYY*LFDDESTQLGKIYINMSCLT*EEQLFQGKITTLEKLSDLPFQKI*HSIAA>RPYQHISDSYILS |
Parental | MVVGQLKA |
MVVG.LKA | |
Retrocopy | MVVG*LKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |