RetrogeneDB ID: | retro_etel_256 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4358:127163..127454(+) | ||
Located in intron of: | ENSETEG00000017657 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000000263 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 59.6 % |
Parental protein coverage: | 77.6 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | EVRVNPVEFNPDFVARMIP-KVEWSALLEAAETLHLTEVPSAPAEGYERDEEFLRKMHHVLLEVDVLEG- |
EV..NPVEFNP.F...MIP...E....L..A.T..L..VP..P.EGYE.DE.F.RKMHHVLLE....EG. | |
Retrocopy | EVHINPVEFNPNFLVPMIP<QLE*LVFLVEAYT*YLAKVPRGPMEGYEWDEDFRRKMHHVLLEEAMVEG> |
Parental | TLQCPESGRLFPISRGIPNKDRNDEETET |
.LQCPES.RLFPIS.GIPN...N.E.T.T | |
Retrocopy | SLQCPESRRLFPISHGIPNNPLNNE*TKT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000017965 | 3 retrocopies | |
Bos taurus | ENSBTAG00000008646 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000018026 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000004644 | 1 retrocopy | |
Equus caballus | ENSECAG00000016960 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000000263 | 4 retrocopies | |
Homo sapiens | ENSG00000173113 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000001334 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000019647 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000004130 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000019857 | 1 retrocopy |