RetrogeneDB ID: | retro_etel_444 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7290:158700..159348(-) | ||
Located in intron of: | ENSETEG00000011314 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AHCY | ||
Ensembl ID: | ENSETEG00000002576 | ||
Aliases: | None | ||
Description: | adenosylhomocysteinase [Source:HGNC Symbol;Acc:343] |
Percent Identity: | 97.69 % |
Parental protein coverage: | 55.96 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MTEKLPYKVADISLAAWGRKALDIAENEMPGLMRMREMYSTSKPLKGARIAGCLHMTVETAVLIETLVAL |
MTEKLPYKVADISLAAW.RKALDIAENEMPGLMRMREMYSTSKPLKGARIAGCLHMTVETAVLIETLVAL | |
Retrocopy | MTEKLPYKVADISLAAWARKALDIAENEMPGLMRMREMYSTSKPLKGARIAGCLHMTVETAVLIETLVAL |
Parental | GAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIH |
GAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIH | |
Retrocopy | GAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIH |
Parental | TKYPQLLSGIRGISEETTTGVHNLYKMKANGILKVPAINVNDSVTKSKFDNLYGCRESLIDDIKRATDVM |
TKYPQLLSGIRGISEET.TG.HNLYKMKANGILKVPAINVNDSVTKSKFDNLYGCRESLID.IK.ATDVM | |
Retrocopy | TKYPQLLSGIRGISEETMTGAHNLYKMKANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKQATDVM |
Parental | IAGKVA |
IAGKVA | |
Retrocopy | IAGKVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000018101 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000007504 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000018303 | 7 retrocopies | |
Echinops telfairi | ENSETEG00000002576 | 1 retrocopy |
retro_etel_444 ,
|
Homo sapiens | ENSG00000101444 | 6 retrocopies | |
Gorilla gorilla | ENSGGOG00000014694 | 5 retrocopies | |
Monodelphis domestica | ENSMODG00000002753 | 1 retrocopy | |
Mus musculus | ENSMUSG00000027597 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000010041 | 4 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000008592 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000016787 | 3 retrocopies | |
Pongo abelii | ENSPPYG00000010935 | 9 retrocopies | |
Pan troglodytes | ENSPTRG00000013414 | 7 retrocopies | |
Rattus norvegicus | ENSRNOG00000017777 | 7 retrocopies | |
Sus scrofa | ENSSSCG00000007278 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000007163 | 3 retrocopies | |
Tursiops truncatus | ENSTTRG00000003632 | 1 retrocopy | |
Xenopus tropicalis | ENSXETG00000019486 | 1 retrocopy |