Parental gene:

ahcy, ENSXETG00000019486

Aliases:None
Description:adenosylhomocysteinase [Source:Jamboree;Acc:XB-GENE-950017]
Organism:Xenopus (Xenopus tropicalis)
Coordinates:GL172674.1:2134876..2149339(+)


>ENSXETG00000019486
ATGTCTGACAAACTGTCCTACAAAGTCGCTGACATCAGCCTGGCCGAATGGGGCAGAAAGGCCATCGAAATTGCTGAGAA
TGAAATGCCCGGACTGATGAAGATGAGGGAGATGTACTCGGAATCCAAGCCCTTGAAAGGAGCCAGGATTGCGGGGTGCC
TGCATATGACCCTCCAGACTGCTGTCCTTATCGAGACCCTGACTGCACTAGGAGCTGAGGTCCAATGGTCCAGCTGCAAC
ATCTTCTCTACACAGGATCATGCTGCTGCAGCCATTGCCAAGACTGGAGTCCCCGTATACGCCTGGAAGGGTGAGACGGA
CGAGGAGTACATTTGGTGCATCGATCAGACCCTGTACTTCAAAGATGGCAAACCCCTCAACATGATCCTGGATGATGGTG
GAGACCTGACCAATCTGGTTCACACCAAGTATCCCCAGCTACTGAAAGGCATTAAAGGAATCTCTGAAGAGACCACCACT
GGCGTGCACAACCTCTACAAAATGAAGGCTAGCGGGACGCTGCAGGTTCCAGCCATTAATGTGAACGACTCTGTTACCAA
GAGTAAGTTTGATAACCTGTACGGATGCAGAGAGTCGCTAATTGATGGCATTAAGCGGGCCACTGACGTTATGATCGCTG
GCAAGGTAGCCGTTGTAGCCGGATATGGTGATGTCGGTAAGGGATGCGCACAAGCACTGAGAGCCTTCGGAGCCCGTGTC
ATCATCACTGAAATTGATCCAATCAATGCACTTCAGGCTGCTATGGAAGGATATGAAGTGACTACAATGGAAGAAGCCAG
CAAAGAAGGAAATATCTTTGTGACCACTACTGGATGTACAGATATCGTAGAGGGCAGCCATTTTGAAAACATGAAAGATG
ATTCCATCGTCTGCAACATTGGCCATTTTGATTGTGAACTGGACGTGAAGTGGCTGAACGACAACGCTGTGAAGAAAGTC
AATATCAAACCCCAGGTGGATCGCTATCTGCTGAAGAATGGCCGCCACATCATTCTGCTCGCTGAGGGCCGCCTGGTGAA
TTTGGGGTGCGCCATGGGGCACCCCAGCTTTGTCATGAGCAATTCATTTACAAATCAGGTGATGGCTCAGATTGAGCTGT
GGACCAATAACGACAAGTATCCTGTCGGCGTATATTTCCTGCCAAAGAAGTTGGATGAGGCCGTAGCAGCTGCCCACCTC
GACAAACTGGGAGTCAAGCTCACCAAGCTGACCGACAAACAAGCCAAGTATCTTGGGTTGGAGAAAGAAGGGCCTTTCAA
ACCCGATCACTACCGATACTAA

Library Parental gene expression (RPM)
SRP007412_brain 65 .43 RPM
SRP007412_heart 81 .15 RPM
SRP007412_kidney 81 .15 RPM
SRP007412_liver 944 .38 RPM
SRP007412_skeletal_muscle 140 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018101 ortholog_one2one 1 retrogene
retro_btau_1140,
Canis familiaris ENSCAFG00000007504 ortholog_one2one 2 retrogenes
retro_cfam_1486, retro_cfam_552,
Callithrix jacchus ENSCJAG00000018303 ortholog_one2many 7 retrogenes
retro_cjac_1028, retro_cjac_1248, retro_cjac_1806, retro_cjac_2132, retro_cjac_2839, retro_cjac_3287, retro_cjac_480,
Echinops telfairi ENSETEG00000002576 ortholog_one2one 1 retrogene
retro_etel_444,
Homo sapiens ENSG00000101444 ortholog_one2one 6 retrogenes
retro_hsap_1496, retro_hsap_2325, retro_hsap_2365, retro_hsap_4213, retro_hsap_571, retro_hsap_803,
Gorilla gorilla ENSGGOG00000014694 ortholog_one2many 5 retrogenes
retro_ggor_1148, retro_ggor_1795, retro_ggor_2822, retro_ggor_3087, retro_ggor_511,
Monodelphis domestica ENSMODG00000002753 ortholog_one2one 1 retrogene
retro_mdom_1974,
Mus musculus ENSMUSG00000027597 ortholog_one2many 1 retrogene
retro_mmus_197,
Nomascus leucogenys ENSNLEG00000010041 ortholog_one2many 4 retrogenes
retro_nleu_1717, retro_nleu_2785, retro_nleu_40, retro_nleu_929,
Oryctolagus cuniculus ENSOCUG00000008592 ortholog_one2many 1 retrogene
retro_ocun_1886,
Otolemur garnettii ENSOGAG00000016787 ortholog_one2one 3 retrogenes
retro_ogar_3223, retro_ogar_3401, retro_ogar_3402,
Pongo abelii ENSPPYG00000010935 ortholog_one2one 9 retrogenes
retro_pabe_1247, retro_pabe_1978, retro_pabe_2108, retro_pabe_2189, retro_pabe_3446, retro_pabe_647, retro_pabe_658, retro_pabe_665, retro_pabe_718,
Pan troglodytes ENSPTRG00000013414 ortholog_one2one 7 retrogenes
retro_ptro_1015, retro_ptro_1698, retro_ptro_1730, retro_ptro_2860, retro_ptro_3011, retro_ptro_559, retro_ptro_771,
Rattus norvegicus ENSRNOG00000017777 ortholog_one2many 7 retrogenes
retro_rnor_1142, retro_rnor_1820, retro_rnor_1903, retro_rnor_2120, retro_rnor_569, retro_rnor_647, retro_rnor_839,
Sus scrofa ENSSSCG00000007278 ortholog_one2many 1 retrogene
retro_sscr_119,
Tarsius syrichta ENSTSYG00000007163 ortholog_one2one 3 retrogenes
retro_tsyr_1178, retro_tsyr_1529, retro_tsyr_1582,
Tursiops truncatus ENSTTRG00000003632 ortholog_one2one 1 retrogene
retro_ttru_1666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xtro_62 65.19 67.44
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Download FASTA sequences of all ENSXETG00000019486 retrocopies