RetrogeneDB ID: | retro_etel_499 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8284:29728..30141(-) | ||
Located in intron of: | ENSETEG00000013940 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF4E | ||
Ensembl ID: | ENSETEG00000007347 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] |
Percent Identity: | 88.81 % |
Parental protein coverage: | 65.74 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LYNHIQLSSNLMPGCDYSLFKDGIEPMEDEK-NKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDD |
LYNHIQLS.NLMPGCDYSL.KDGIE.M......KR.GR.LIT.....RRSDLDRFWLETLLCLIGESFDD | |
Retrocopy | LYNHIQLSLNLMPGCDYSLLKDGIECMWEGE<DKRRGRGLITM----RRSDLDRFWLETLLCLIGESFDD |
Parental | YSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKMAIGYQSHADTATKSGSTTKNR |
YSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKMAIGYQSHADTATKSGSTTKNR | |
Retrocopy | YSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKMAIGYQSHADTATKSGSTTKNR |
Parental | FVV |
FVV | |
Retrocopy | FVV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |