RetrogeneDB ID: | retro_fcat_51 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | B1:140911690..140912365(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSFCAG00000006803 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NAA10 | ||
Ensembl ID: | ENSFCAG00000028705 | ||
Aliases: | None | ||
Description: | N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:HGNC Symbol;Acc:18704] |
Percent Identity: | 83.03 % |
Parental protein coverage: | 97.32 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSH |
.NMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDE.GKIVGYVLAKMEEDPDDVPHGHITSLAVKRSH | |
Retrocopy | INMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDEDGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSH |
Parental | RRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL |
RRLGLAQKLM.QASRAMIENF.AKYVSLHVRKSNRAALHLYSNTLNFQ.SEVEPKYYADGEDAYAMKRDL | |
Retrocopy | RRLGLAQKLMEQASRAMIENFSAKYVSLHVRKSNRAALHLYSNTLNFQVSEVEPKYYADGEDAYAMKRDL |
Parental | TQMADELRRHLELKEKGRHVVLGSIENKVESRGNSLPSSGEACREDKGLAAEDSGGDSKDLSEVSETTES |
..MA.ELRR..ELKEKGR.VVLGS.EN..E.RG..LPSS.E...E.K..AA.DS..D.K...E.SE..ES | |
Retrocopy | SHMANELRRQPELKEKGRYVVLGSKENQ-ETRGSTLPSSEEDGEEAKIPAADDSSNDHK---EHSESMES |
Parental | TDVKDSSE |
TD...SSE | |
Retrocopy | TDAQNSSE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 18 .59 RPM |
SRP017611_kidney | 0 .00 RPM | 23 .19 RPM |
SRP017611_liver | 0 .00 RPM | 17 .59 RPM |