RetrogeneDB ID: | retro_itri_565 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393301.1:9807090..9807455(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000008658 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.42 % |
Parental protein coverage: | 60.4 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LNDITAKERFSP-ITSNLINLLAENGRLGSAHGIISAFSTIMSVHRGEVPCTVTTASPLPEAVLSELKTV |
L.D.T.K.RFSP.I.SNL..LLA.N..LG.AHG.ISAFST..SV..GEVPCTVTT.SPL.EAV.SEL.TV | |
Retrocopy | LCDMTTKGRFSP<IRSNLMDLLAKNSCLGNAHGFISAFSTTVSVYLGEVPCTVTTTSPLSEAVFSELRTV |
Parental | LKSFLSQGQVLKLEVKTDPAIMGGMIVRIGEKYVDMSAKTKIQKLTRAMRESI |
LKSFLSQGQVLKLEVKTD.AIM..MIV.IGEKYVDMSAK.KIQKL..AM.ESI | |
Retrocopy | LKSFLSQGQVLKLEVKTDVAIMS*MIVHIGEKYVDMSAKNKIQKLSWAMQESI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |