RetrogeneDB ID: | retro_ogar_3518 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL874246.1:8335..8823(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000028029 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | B4USW5_OTOGA | ||
Ensembl ID: | ENSOGAG00000015850 | ||
Aliases: | None | ||
Description: | Mitochondrial ATP synthase, O subunit (Predicted) [Source:UniProtKB/TrEMBL;Acc:B4USW5] |
Percent Identity: | 88.41 % |
Parental protein coverage: | 76.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAAPAVSGISRQVRCFSTSVARPFTKLVRPPVQIHGVEGRYATALYSAASKQNKLEQVEKELLRVSQLLK |
MAAPAVSGISRQV..FSTSVARPF.KL.RPPVQIHGVEGRYATALYSAASKQNKLEQ.EKELLRVSQLLK | |
Retrocopy | MAAPAVSGISRQVQSFSTSVARPFAKLLRPPVQIHGVEGRYATALYSAASKQNKLEQGEKELLRVSQLLK |
Parental | EPKMAASILNPYVKRSVKVKSLNDITAKERFSPLTANLMNLLAENGRLSNTQGVI-SAFSTMMSVHRGEV |
EPK..ASILNPYVKRSVKVKSL.DITAKE.FSP.T.NLMNLLAENG.LSNTQGVI.SAFSTMM.VH.GEV | |
Retrocopy | EPKTVASILNPYVKRSVKVKSLKDITAKEPFSPVTSNLMNLLAENGHLSNTQGVI<SAFSTMMRVHCGEV |
Parental | PCTVTTASPLEEATLTELKTVLKS |
.CTVTTA.PLEEATLTELKTVL.. | |
Retrocopy | LCTVTTAPPLEEATLTELKTVLEA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |