RetrogeneDB ID: | retro_meug_1780 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold58554:9563..9893(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFAB1 | ||
Ensembl ID: | ENSMEUG00000012681 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa [Source:HGNC Symbol;Acc:7694] |
Percent Identity: | 61.26 % |
Parental protein coverage: | 77.08 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | AALAPPSRPRAPALALVRPLGSAPCAAAGRRRRQPAPAHMPVSGIFLQLSRQYSDLPPLTLESITDRVLY |
.A..P...P......L.R..G.......G...R...P..M..S.I.LQL..QYSDLP.LTLESI.D.VL. | |
Retrocopy | SATCPGPPPSTWSSSLARS-GVRRWGGGGEWQRRSLPLNMQDSKIILQLNSQYSDLPSLTLESIRDHVLH |
Parental | VLKLYDKIDPEKLSVSSHFMKDLGLDSLDQVEIIMAMEDEF |
VLK.YDKIDPEKLS.SSHF.KDLGLDSLDQVEIIMAMEDEF | |
Retrocopy | VLK*YDKIDPEKLSESSHFIKDLGLDSLDQVEIIMAMEDEF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |