Parental gene: | ENSFCAG00000013241 |
| Aliases: | None |
| Description: | None |
| Organism: | Cat (Felis catus) |
| Coordinates: | E3:24719986..24728481(+) |
>ENSFCAG00000013241
ATGGCGGCTCGTGTCCTTTCCGCTTGTGTCCGCCGACTGCCTGCGGCCTTCGCGCCGCTGCCCCGGGTCCCCACGCTGGC
CGCAGTCCGGCCGCTCAGCAACACCCTCTGCCCCGCGGGGGCCCGGACGAGGCCTGGGGTTCCGCATCCTGCCTCAATAC
TGGTTTCCGTGCCAGTAACGCAGTTGTGCCGCCAGTATAGTGATGCGCCCCCTTTGACGTTAGAGGGAATCAAGGACCGT
GTTCTTTATGTCTTGAAACTCTATGACAAGATCGACCCTGAAAAGCTCTCGGTAAATTCCCACTTTATGAAAGACCTGGG
CTTAGACAGTTTGGACCAAGTGGAGATTATCATGGCCATGGAGGACGAATTTGGGTTTGAAATCCCTGATACAGATGCTG
AGAAGTTAATGTGTCCACAAGAAATTGTAGATTACATTGCAGATAAGAAGGATGTTTATGAATAA
ATGGCGGCTCGTGTCCTTTCCGCTTGTGTCCGCCGACTGCCTGCGGCCTTCGCGCCGCTGCCCCGGGTCCCCACGCTGGC
CGCAGTCCGGCCGCTCAGCAACACCCTCTGCCCCGCGGGGGCCCGGACGAGGCCTGGGGTTCCGCATCCTGCCTCAATAC
TGGTTTCCGTGCCAGTAACGCAGTTGTGCCGCCAGTATAGTGATGCGCCCCCTTTGACGTTAGAGGGAATCAAGGACCGT
GTTCTTTATGTCTTGAAACTCTATGACAAGATCGACCCTGAAAAGCTCTCGGTAAATTCCCACTTTATGAAAGACCTGGG
CTTAGACAGTTTGGACCAAGTGGAGATTATCATGGCCATGGAGGACGAATTTGGGTTTGAAATCCCTGATACAGATGCTG
AGAAGTTAATGTGTCCACAAGAAATTGTAGATTACATTGCAGATAAGAAGGATGTTTATGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 27 .29 RPM |
| SRP017611_kidney | 47 .61 RPM |
| SRP017611_brain | 23 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000014304 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000017667 | ortholog_many2many | 3 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000003558 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020616 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000012038 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000017122 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000004779 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006320 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000001032 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012681 | ortholog_one2many | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000007778 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000020522 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016352 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012142 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000030869 | ortholog_one2many | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008457 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005562 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007192 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007889 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018129 | ortholog_many2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000010795 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000024657 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000005258 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1104 | 61.87 | 87.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1181 | 52.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_2012 | 87.06 | 53.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000013241 retrocopies