RetrogeneDB ID: | retro_meug_1901 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold70208:473..906(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C1QBP | ||
Ensembl ID: | ENSMEUG00000014882 | ||
Aliases: | None | ||
Description: | complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243] |
Percent Identity: | 75.68 % |
Parental protein coverage: | 72.28 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | INNSIPPTFDDEPSEGQKVQEQQEPELTSTPNFVVEVVKNDTKKALVLDCHYPENEVGQEDEDE-SDIFS |
I...IP.TFDDEP.EGQKVQE..E.E.TST..F.VEV.K.DTKKALVLDCHYPE.EVGQE.EDE..DIFS | |
Retrocopy | ILTTIPSTFDDEPLEGQKVQEP-ESEVTSTLKFMVEVLKDDTKKALVLDCHYPEDEVGQENEDE<GDIFS |
Parental | IREVSFQPTTESDWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNTFADELIELSTALEHQ-EYINFLED |
I..V.FQPT.E..WKD.NYTLNTD.LDWALYDHLMDFLAD.GV.NTFAD.L.EL..ALEHQ.EYI.FLED | |
Retrocopy | ISQVTFQPTAEPNWKDANYTLNTDFLDWALYDHLMDFLADLGVGNTFADKLMELNMALEHQ<EYISFLED |
Parental | LKGFVKCQ |
LK.FVK.Q | |
Retrocopy | LKRFVKYQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000006043 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000015542 | 3 retrocopies | |
Callithrix jacchus | ENSCJAG00000011352 | 6 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000008887 | 3 retrocopies | |
Felis catus | ENSFCAG00000026474 | 3 retrocopies | |
Homo sapiens | ENSG00000108561 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000002745 | 5 retrocopies | |
Macropus eugenii | ENSMEUG00000014882 | 13 retrocopies | |
Macaca mulatta | ENSMMUG00000006592 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000011246 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000009081 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000001610 | 5 retrocopies | |
Ochotona princeps | ENSOPRG00000013150 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000007870 | 6 retrocopies | |
Pan troglodytes | ENSPTRG00000008631 | 3 retrocopies | |
Pteropus vampyrus | ENSPVAG00000002466 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000002441 | 2 retrocopies |