RetrogeneDB ID: | retro_meug_621 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold147843:1296..1911(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PSMB6 | ||
Ensembl ID: | ENSMEUG00000010676 | ||
Aliases: | None | ||
Description: | proteasome (prosome, macropain) subunit, beta type, 6 [Source:HGNC Symbol;Acc:9543] |
Percent Identity: | 93.17 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLSFHSIEL |
TTIMAVQFDGG.VLGADSRTTT.SYIAN.VTDKLTPIHD.IFCCRSGSAADTQAVA.AVTYQLSFHSIEL | |
Retrocopy | TTIMAVQFDGGLVLGADSRTTTRSYIAN*VTDKLTPIHDQIFCCRSGSAADTQAVANAVTYQLSFHSIEL |
Parental | NEPPLVHTAANLFKEMCYRYREDLMAGIIVAGWDPYEGGQVYSVPMGGMMVRQPFSIGGSGSSYIYGYVD |
NEPPLVHTAANLFKEMCY.Y.EDLMAGII.AGWDPYEGGQVYSVPMGGMMVRQPFSIGGSGSSYI.GYVD | |
Retrocopy | NEPPLVHTAANLFKEMCYGY*EDLMAGIIIAGWDPYEGGQVYSVPMGGMMVRQPFSIGGSGSSYI*GYVD |
Parental | ATYQEGMNEKQCLQFTANALALAMERDGSSGGVIRLAAITEKGVERQVLLGDQLPRFPVATYPST |
A.YQEGMNEKQCLQFTANALALAME.DGSSGGVI.LAAITEKGVE.QVLLGDQLPRFPVA.YPST | |
Retrocopy | ASYQEGMNEKQCLQFTANALALAME*DGSSGGVIWLAAITEKGVEWQVLLGDQLPRFPVAIYPST |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |