RetrogeneDB ID: | retro_mluc_118 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430457:229495..230080(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000028461 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000030708 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.85 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAAQIPIVATTAAPGISRNSKKRPASPSHNGSSGG--GGYGPGKKKKVSASGFAQGISMEAMSENKMVPS |
MAA.IPIVA.TAAPGISRNSKKRPASPSHNGSS....GGYGPGKKKKVSAS.FAQGISMEAMSEN.MVPS | |
Retrocopy | MAALIPIVASTAAPGISRNSKKRPASPSHNGSSSSSSGGYGPGKKKKVSASSFAQGISMEAMSENQMVPS |
Parental | DYSTGPMEKTSKPLPFKDPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFK |
D.STGPMEKTSKPLPFKDPNFVHSG.GGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFK | |
Retrocopy | DFSTGPMEKTSKPLPFKDPNFVHSGRGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFK |
Parental | PAKKYSDVSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP |
PAKKYSDVSGLLANYTDPQSKLRFSTIEEFSY.RRLPSD.VTGYLALRKATSIVP | |
Retrocopy | PAKKYSDVSGLLANYTDPQSKLRFSTIEEFSYTRRLPSD-VTGYLALRKATSIVP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000017884 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000021025 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000030708 | 3 retrocopies |
retro_mluc_118 , retro_mluc_1892, retro_mluc_1942,
|
Macaca mulatta | ENSMMUG00000020108 | 1 retrocopy | |
Mus musculus | ENSMUSG00000047989 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000011443 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000017436 | 1 retrocopy |