RetrogeneDB ID: | retro_mluc_1942 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429958:1980031..1980472(+) | ||
Located in intron of: | ENSMLUG00000000286 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000030708 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.5 % |
Parental protein coverage: | 78.24 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | KKKVSASGFAQGISMEAMSENKMVPSDYSTGPMEKTSKPLPFKDPNFVHSGHGGAVAGKKNRTWKNLKQI |
..KVS.S.FAQGISMEAMSE.K.VPSD.S.GP.EKT.KPL.FKDPNFV.SGHGG.VAG.KNRTWKN..QI | |
Retrocopy | EEKVSTSSFAQGISMEAMSEKKTVPSDFSIGPTEKTWKPLSFKDPNFVPSGHGG-VAG-KNRTWKN-*QI |
Parental | LASERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGY |
L.SERALPWQLN.P.YFS.DAPPSFKPA.K.SDV..LLANY.DPQS.LRF.T...F..I.RLPS.VVTGY | |
Retrocopy | LISERALPWQLNNPIYFSSDAPPSFKPA-KHSDVLVLLANYSDPQSNLRFNTMKDFPCIHRLPSYVVTGY |
Parental | LALRKATSIVP |
LALR...SIVP | |
Retrocopy | LALRNTISIVP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000017884 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000021025 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000030708 | 3 retrocopies |
retro_mluc_118, retro_mluc_1892, retro_mluc_1942 ,
|
Macaca mulatta | ENSMMUG00000020108 | 1 retrocopy | |
Mus musculus | ENSMUSG00000047989 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000011443 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000017436 | 1 retrocopy |