RetrogeneDB ID: | retro_mluc_1892 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429939:2284046..2284622(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000030708 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.05 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAAQIPIVATTAAPGISRNSKKRPASPSHNGSSGGGGYGPGKKKKVSASGFAQGISMEAMSENKMVPSDY |
M.AQI.IVA.TA.PGI..NS.KRPASPSH.GSS.G..YG.GKKKKVSAS.FAQGISMEAMSE.KMVPSD. | |
Retrocopy | MVAQISIVAPTAGPGIAWNSQKRPASPSHSGSSSGE-YGAGKKKKVSASSFAQGISMEAMSEDKMVPSDF |
Parental | STGPMEKTSKPLPFKDPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPA |
STGP.EKTSKPLPFKDPNFVHSGHG..VAGKKNRTWKNLK.ILASERALPWQLNDP.YFSIDAPPSFKPA | |
Retrocopy | STGPVEKTSKPLPFKDPNFVHSGHGSTVAGKKNRTWKNLK*ILASERALPWQLNDPGYFSIDAPPSFKPA |
Parental | KKYSDVSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP |
.KYSDVSGLLA.YTDPQSKLRFST.EEFSYI.RLPSDVVTGYLALRKAT.IVP | |
Retrocopy | MKYSDVSGLLADYTDPQSKLRFSTTEEFSYIQRLPSDVVTGYLALRKATHIVP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000017884 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000021025 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000030708 | 3 retrocopies |
retro_mluc_118, retro_mluc_1892 , retro_mluc_1942,
|
Macaca mulatta | ENSMMUG00000020108 | 1 retrocopy | |
Mus musculus | ENSMUSG00000047989 | 2 retrocopies | |
Ochotona princeps | ENSOPRG00000011443 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000017436 | 1 retrocopy |