RetrogeneDB ID: | retro_mluc_1576 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429865:478348..478689(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUDT21 | ||
Ensembl ID: | ENSMLUG00000004968 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.07 % |
Parental protein coverage: | 50.66 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEK |
P.EDE.EGLK.LMTEIL..QDGVLQDWVIDDCIGNWWRPNFEPP.YPYIPAH..KPKEH.KLFLVQLQEK | |
Retrocopy | PKEDEDEGLKCLMTEILRHQDGVLQDWVIDDCIGNWWRPNFEPPHYPYIPAHNIKPKEH-KLFLVQLQEK |
Parental | ALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQL-LSRFNFIYN |
ALFAVPKNYKLVA.PLFELYDNAPGY.P.ISSL.QL.L.RFNFIYN | |
Retrocopy | ALFAVPKNYKLVATPLFELYDNAPGYRPYISSLSQL<LTRFNFIYN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000016628 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000012724 | 3 retrocopies | |
Equus caballus | ENSECAG00000001043 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000003402 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000028465 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000004968 | 2 retrocopies |
retro_mluc_1576 , retro_mluc_999,
|
Mustela putorius furo | ENSMPUG00000003451 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000017224 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000009651 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000029848 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000007664 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000003701 | 2 retrocopies |