Parental gene:

NUDT21, ENSEEUG00000003402

Aliases:None
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Source:HGNC Symbol;Acc:13870]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_1069:5344..20939(-)


>ENSEEUG00000003402
ATGTCTGTGGTGCCACCCAATCGCTCTCAAACCGGCTGGCCCCGGGGGGTCAACCAATTCGGCAACAAGTACATCCAGCA
GACCAAGCCCCTCACCCTGGAGCGCACCATCAACCTGTACCCTCTTACAAATTATACTTTTGGTACTAAAGAGCCCCTCT
ATGAGAAGGACAGTTCCGTTGCAGCCAGATTTCAGCGCATGAGGGAGGAATTTGATAAAATTGGAATGAGGAGGACTGTA
GAAGGGGTTCTGATTGTGCATGAACACCGGCTACCTCATGTGTTACTGCTACAGCTGGGAACAACGTTCTTCAAACTACC
TGGTGGTGAGCTTAACCCAGGAGAAGATGAAGTTGAAGGATTGAAACGCTTAATGACAGAGATACTGGGTCGTCAGGATG
GAGTCCTGCAAGACTGGGTCATTGATGACTGCATTGGTAATTGGTGGAGACCAAATTTTGAGCCTCCTCAGTATCCATAT
ATTCCTGCACATATTACAAAACCCAAAGAACATAAGAAGTTGTTTTTGGTTCAGCTTCAAGAAAAAGCCTTATTTGCAGT
CCCTAAAAATTATAAGCTTGTAGCTGCACCATTGTTTGAATTATATGACAATGCACCAGGTTATGGACCTATCATTTCTA
GTCTTCCTCAGCTTTTGAGCAGGTTCAATTTTATATACAACTGA

Library Parental gene expression (RPM)
SRP017611_liver 19 .61 RPM
SRP017611_kidney 33 .01 RPM
SRP017611_brain 34 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016628 ortholog_one2one 1 retrogene
retro_amel_540,
Callithrix jacchus ENSCJAG00000012724 possible_ortholog 3 retrogenes
retro_cjac_1121, retro_cjac_2211, retro_cjac_4100,
Equus caballus ENSECAG00000001043 ortholog_one2one 1 retrogene
retro_ecab_292,
Loxodonta africana ENSLAFG00000028465 ortholog_one2one 1 retrogene
retro_lafr_610,
Myotis lucifugus ENSMLUG00000004968 ortholog_one2one 2 retrogenes
retro_mluc_1576, retro_mluc_999,
Mustela putorius furo ENSMPUG00000003451 ortholog_one2one 1 retrogene
retro_mputfur_158,
Oryctolagus cuniculus ENSOCUG00000017224 ortholog_one2one 2 retrogenes
retro_ocun_154, retro_ocun_87,
Sarcophilus harrisii ENSSHAG00000009651 ortholog_one2one 1 retrogene
retro_shar_469,
Sus scrofa ENSSSCG00000029848 possible_ortholog 2 retrogenes
retro_sscr_117, retro_sscr_185,
Tupaia belangeri ENSTBEG00000007664 ortholog_one2one 1 retrogene
retro_tbel_4003,
Vicugna pacos ENSVPAG00000003701 ortholog_one2one 2 retrogenes
retro_vpac_340, retro_vpac_605,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_35 60.53 66.08
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Download FASTA sequences of all ENSEEUG00000003402 retrocopies