RetrogeneDB ID: | retro_mluc_2504 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430608:38060..38758(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000027554 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENOPH1 | ||
Ensembl ID: | ENSMLUG00000014460 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.29 % |
Parental protein coverage: | 89.27 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | DILFPYIKENVKEYLQ-THWEEEECQQDVSLLRKQAEEDSHLDGAVPIPVAPENGTDDLQLMIQAVVDN- |
D.LFPYIKE.VKEYLQ.THWEEEECQQDV.LLRKQAEEDSHLDGAVPIP.APE.G.DDLQLMIQAV.... | |
Retrocopy | DVLFPYIKEKVKEYLQ>THWEEEECQQDVGLLRKQAEEDSHLDGAVPIPAAPEDGADDLQLMIQAVAGT< |
Parental | VCWQMSLDRKTTALKQLQGHMWRAAFTAG-HVKAEFFEDVVPAVRKWREAGMKVYIYSSGSVEAQKLLFG |
V..Q.SLDRKT.ALKQLQGHMWRAAF.AG.HVKAEFFEDV.PAVRKW..AGMK.YIY.SGSVEAQKLLFG | |
Retrocopy | VSRQVSLDRKTPALKQLQGHMWRAAFPAG<HVKAEFFEDVGPAVRKWKQAGMKAYIYASGSVEAQKLLFG |
Parental | YSTEGDILELVDGHFDTKIGHKVESESYRKIANSIGCSTNNILFLTDVTLEASAAEEADVHVAVVVRPGN |
.STEGDILELVDGHF.TK.GHKVESES..KIANSIGCSTNNILFLTD.TLEASAAEEADVH.A.VVRPGN | |
Retrocopy | CSTEGDILELVDGHFHTKTGHKVESESDGKIANSIGCSTNNILFLTDGTLEASAAEEADVHGAAVVRPGN |
Parental | AGLTDDEKTYYSLITSFSELYLPSST |
AGLTDDEKTYYSLITSFSELYLPSST | |
Retrocopy | AGLTDDEKTYYSLITSFSELYLPSST |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000005140 | 2 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000003283 | 4 retrocopies | |
Callithrix jacchus | ENSCJAG00000015251 | 2 retrocopies | |
Equus caballus | ENSECAG00000019612 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000004274 | 1 retrocopy | |
Homo sapiens | ENSG00000145293 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000003719 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000008619 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000011458 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014460 | 1 retrocopy |
retro_mluc_2504 ,
|
Otolemur garnettii | ENSOGAG00000002502 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000014887 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000016218 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000001800 | 1 retrocopy |