RetrogeneDB ID: | retro_chof_2150 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_5353:8150..8933(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENOPH1 | ||
Ensembl ID: | ENSCHOG00000003283 | ||
Aliases: | None | ||
Description: | enolase-phosphatase 1 [Source:HGNC Symbol;Acc:24599] |
Percent Identity: | 96.93 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MVVLSVPAEVTAILLDIEGTTTPIAFVKDILFPYIKENVKEYLQTHWEEEECQQDVSLLRKQAEEDIHLD |
MVVLS.PAEVTAILLDIEGTTTPIAFVKDI.FPY.KENVKEYLQTHWEEEECQQD.SLLRKQAEEDIHLD | |
Retrocopy | MVVLSMPAEVTAILLDIEGTTTPIAFVKDISFPYNKENVKEYLQTHWEEEECQQDLSLLRKQAEEDIHLD |
Parental | GAVPIPAVSGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWKAAFTAGRMKAEFFEDVVPAVK |
GAVPIPAVSGNGVDDLQQM.QAVVDNVCWQMSLDRKTTALKQLQGHMWKAAFTAGRMKAEFFEDVVPA.K | |
Retrocopy | GAVPIPAVSGNGVDDLQQMTQAVVDNVCWQMSLDRKTTALKQLQGHMWKAAFTAGRMKAEFFEDVVPADK |
Parental | KWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNILFL |
KWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESES.RKIADSIG.STNNILFL | |
Retrocopy | KWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESSRKIADSIGSSTNNILFL |
Parental | TDVTLEASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFNELYLPSST |
TDVTLEASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFNELYLPSST | |
Retrocopy | TDVTLEASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFNELYLPSST |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000005140 | 2 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000003283 | 4 retrocopies | |
Callithrix jacchus | ENSCJAG00000015251 | 2 retrocopies | |
Equus caballus | ENSECAG00000019612 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000004274 | 1 retrocopy | |
Homo sapiens | ENSG00000145293 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000003719 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000008619 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000011458 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014460 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000002502 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000014887 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000016218 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000013987 | 2 retrocopies | |
Tursiops truncatus | ENSTTRG00000001800 | 1 retrocopy |