RetrogeneDB ID: | retro_mluc_590 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:3227764..3228359(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MAK16 | ||
Ensembl ID: | ENSMLUG00000002758 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.89 % |
Parental protein coverage: | 66.44 % |
Number of stop codons detected: | 7 |
Number of frameshifts detected | 1 |
Parental | MQSDDVIWDTLGNKQFCSFKIRTKTQGFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQCFLYMKVIER |
MQSDDVIW.TLGNK..CSF.IRTKTQ.FCR.EYSLT.LCN...CPL.N..YATIKE.KGQC.LYMKVI.. | |
Retrocopy | MQSDDVIWNTLGNK*LCSFEIRTKTQSFCRTEYSLTRLCNLLPCPLVNN*YATIKEDKGQC*LYMKVIKQ |
Parental | AAFPRRLWERVRLHKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYLIRIRKLTLKRQRKLVPLSKK |
.AFPR.LWERV.LH.N.EKALE.IDENLIYWP.FI.HKCK..FT.ITQYL..I.KLTLK.Q.KLVPLS.K | |
Retrocopy | VAFPRHLWERVWLHNNDEKALEPIDENLIYWPHFIQHKCKLSFTMITQYLL*I*KLTLK*QGKLVPLSEK |
Parental | VERR-EKRREEKALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKALEQQEAGSD |
VE.R.EKRREEKALIAAQLDN.IEKELL.RLKQ..YGDIYNFPIHA.DKA.E.QEA.SD | |
Retrocopy | VEQR>EKRREEKALIAAQLDNVIEKELLGRLKQGMYGDIYNFPIHALDKAVE*QEAESD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000009081 | 5 retrocopies | |
Dasypus novemcinctus | ENSDNOG00000008424 | 1 retrocopy | |
Latimeria chalumnae | ENSLACG00000018758 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000006945 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000002758 | 1 retrocopy |
retro_mluc_590 ,
|
Oryctolagus cuniculus | ENSOCUG00000008735 | 3 retrocopies | |
Sus scrofa | ENSSSCG00000015832 | 1 retrocopy |