Parental gene:

MAK16, ENSSSCG00000015832

Aliases:None
Description:MAK16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13703]
Organism:Pig (Sus scrofa)
Coordinates:15:59542890..59554103(-)


>ENSSSCG00000015832
ATGCAGTCAGATGATGTTATCTGGGATACACTAGGAAACAAGCAATTTTGTTCCTTCAAAATCAGAACCAAGACTCAGAG
TTTTTGTAGAAATGAATACAGCTTGACTGGACTGTGTAATCGGTCATCCTGTCCCCTGGCAAATAGTCAGTATGCCACTA
TCAAAGAAGAGAAAGGACAGTGCTATCTGTATATGAAGGTTATAGAACGAGCAGCTTTCCCTAGGCGTCTCTGGGAACGG
GTCCGTCTTCATAAAAACTATGAGAAAGCACTGGAACAAATAGATGAAAATCTAATTTACTGGCCTCGTTTCATTAGACA
CAAATGTAAGCAAAGATTCACCAAGATCACCCAGTACCTAATTCGAATTCGAAAACTTACATTAAAGCGACAGAGGAAAC
TTGTTCCTTTGAGTAAGAAGGTGGAACGGAGGGAAAAAAGAAGAGAGGAAAAGGCATTGATAGCTGCTCAGCTGGACAAT
GCTATCGAAAAGGAATTGCTGGAGAGACTCAAACAAGATACGTATGGCGATATCTACAACTTCCCCATCCATGCCTTTGA
TAAGGCCCTGGAGCAGCAGGAGGCAGGGAGTGACTCTTCAGATGCTGAGGAAAAAGACGAAGAAGATGAAGAAGATGTGG
GGAAAAGAGAGTTTGTGGAAGATGATGAAGTGGATGAGAGTGACATAAGTGACTTTGAGGATATGGATAAACTGGATGCC
AGCAGTGATGAAGAGCAGGATGATAAATCCTCCACTGAGGAAGAGGAAAAGGCCCTTGATGCCAAATACAAAGGCAAAAC
ACCTCTGAAAGGACCTTTGAGGAGGAAACGAGCATATGTGGAAATAGAATATGAGCAGGAGACAGAGCCTATGGCTAAGG
CCAAAACCACGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 7 .43 RPM
SRP014902_testis 15 .56 RPM
SRP018856_adipose 15 .70 RPM
SRP018288_kidney 26 .79 RPM
SRP018288_lung 30 .45 RPM
SRP018288_liver 18 .23 RPM
SRP018288_heart 30 .25 RPM
SRP035408_liver 16 .41 RPM
SRP035408_brain 19 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009081 ortholog_one2one 5 retrogenes
retro_chof_2336, retro_chof_2538, retro_chof_531, retro_chof_867, retro_chof_948,
Dasypus novemcinctus ENSDNOG00000008424 ortholog_one2one 1 retrogene
retro_dnov_624,
Latimeria chalumnae ENSLACG00000018758 ortholog_one2one 1 retrogene
retro_lcha_67,
Macropus eugenii ENSMEUG00000006945 ortholog_one2one 1 retrogene
retro_meug_1291,
Myotis lucifugus ENSMLUG00000002758 ortholog_one2one 1 retrogene
retro_mluc_590,
Oryctolagus cuniculus ENSOCUG00000008735 ortholog_one2one 3 retrogenes
retro_ocun_1053, retro_ocun_1298, retro_ocun_908,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_917 75.76 76.77
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Download FASTA sequences of all ENSSSCG00000015832 retrocopies