RetrogeneDB ID: | retro_mluc_632 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:13986876..13987506(-) | ||
Located in intron of: | ENSMLUG00000013656 | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000003264 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000009117 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.05 % |
Parental protein coverage: | 82.68 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LPDAGYEFDICFTSLLKRAIRTLWIVLDVTDQMWLPVVRTWRLNERHYGALTGLNKAETAAKHGEAQVKI |
L.DAG.EFDICFTS..KRAI.T.W.VLD..DQMW.PVVRTW.LNE.HYG.LTGLNKAETAAKHG.AQVKI | |
Retrocopy | LRDAGFEFDICFTSVQKRAIWTFWAVLDAIDQMWQPVVRTWHLNEWHYGGLTGLNKAETAAKHGKAQVKI |
Parental | WRRSYDIPPPPMEPDHPFYSNISKDRRYADLTEDQLPSSESLKDTIARALPFWNEEIVPQIKEGKRVLIA |
WRRSYDIP.PPMEPDHPFYSNISKDRRYADLTEDQLPS.ESLKDTIARALPFWNEEIVPQIKEGK.VLIA | |
Retrocopy | WRRSYDIPSPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKQVLIA |
Parental | AHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVRKAMEAVAAQGKTKK |
AHGNSLRGIVKHLEGLSEEAIMELNL.TGIP.VYELDKN.KPIKPMQFL.DEET.RKAMEAVAAQGK.KK | |
Retrocopy | AHGNSLRGIVKHLEGLSEEAIMELNLLTGIPTVYELDKNFKPIKPMQFLRDEETMRKAMEAVAAQGKAKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000012697 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000009062 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000016575 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000006844 | 4 retrocopies | |
Echinops telfairi | ENSETEG00000002467 | 1 retrocopy | |
Homo sapiens | ENSG00000171314 | 12 retrocopies | |
Gorilla gorilla | ENSGGOG00000028602 | 13 retrocopies | |
Myotis lucifugus | ENSMLUG00000009117 | 6 retrocopies |
retro_mluc_1280, retro_mluc_1595, retro_mluc_1741, retro_mluc_2246, retro_mluc_632 , retro_mluc_745,
|
Macaca mulatta | ENSMMUG00000020027 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000004242 | 4 retrocopies | |
Pongo abelii | ENSPPYG00000002530 | 9 retrocopies | |
Rattus norvegicus | ENSRNOG00000050585 | 7 retrocopies | |
Drosophila melanogaster | FBgn0014869 | 1 retrocopy |