RetrogeneDB ID: | retro_mmur_1571 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_846:46645..46999(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GSTM3 | ||
Ensembl ID: | ENSMICG00000005185 | ||
Aliases: | None | ||
Description: | glutathione S-transferase mu 3 (brain) [Source:HGNC Symbol;Acc:4635] |
Percent Identity: | 56.3 % |
Parental protein coverage: | 52.89 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | CGDTEEEKIRVDIMENQVMDLRTQLIRLCYNSEHEKLKPQYLEQLPGQLKQFSLFLGKYLWFAGDKLTFV |
CG.TE...I..D..ENQ..D....LI.LC.....EKLKP.YLE....QLK.F.LFLG....F.G.KLT.V | |
Retrocopy | CGQTEGKEIPADVLENQITDFHR*LIQLCSTLTIEKLKPPYLEPPREQLKPF-LFLGRFSSFPGEKLTLV |
Parental | DFLTYDVLDQNRMFEPRCLEEFPNLKAFMCRFEALEKIAAYMQSDRFFK |
.FLT.DVLDQN.MFE..CL.E..NLK.FMC...ALEK.AA..Q...FFK | |
Retrocopy | NFLTWDVLDQNCMFELKCLDESLNLKPFMCYVVALEKKAASEQFACFFK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000005380 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000003168 | 1 retrocopy | |
Erinaceus europaeus | ENSEEUG00000014211 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000005817 | 2 retrocopies | |
Homo sapiens | ENSG00000134202 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000005185 | 1 retrocopy |
retro_mmur_1571 ,
|
Macaca mulatta | ENSMMUG00000008029 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000001899 | 1 retrocopy | |
Mus musculus | ENSMUSG00000004032 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000003302 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000001063 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000047034 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000006821 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000006736 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000009682 | 1 retrocopy |