RetrogeneDB ID: | retro_mputfur_1507 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897184.1:1075257..1075707(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS11 | ||
Ensembl ID: | ENSMPUG00000002599 | ||
Aliases: | None | ||
Description: | ribosomal protein S11 [Source:HGNC Symbol;Acc:10384] |
Percent Identity: | 63.64 % |
Parental protein coverage: | 96.2 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | DIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRI |
DIQ.E.AY..Q..IFQ.KK.VLLGETGKEKLP.YYKNIGLGFK.PKEA.E..YIDKKCPFT.NV.I.G.I | |
Retrocopy | DIQSEHAYSQQLKIFQTKK-VLLGETGKEKLP*YYKNIGLGFKVPKEATEAAYIDKKCPFTSNVAI*GWI |
Parental | LSGVVTKMKMQRTI-VIRRDYLHYIRKYNRFEKRHKNMS-VHLSPCFRDVQIGDIVTVGECRPLSKTVRF |
..G.VTKMKM.RTI.VI..D..H...K....EK.HK.MS...L..CF.D.QI..I.TV..C..LS.T..F | |
Retrocopy | VFGMVTKMKMERTI>VIQQDCCHHV*KHSYSEKHHK-MS<LYLPSCFTDAQIRNIITVDKCQSLSQTTYF |
Parental | NVLKVTKAAGTKKQ |
..LKVTK..GTKKQ | |
Retrocopy | TILKVTKHTGTKKQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |