RetrogeneDB ID: | retro_amel_757 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192610.1:1230068..1230537(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS11 | ||
Ensembl ID: | ENSAMEG00000014020 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.75 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRG |
MADI.TE...QKQ.TIFQNKKRVLLGETGK.KLPRYYKNIGLGFK.PKEA..G.Y.DKK.P..GNVSI.G | |
Retrocopy | MADIRTEGVHQKQLTIFQNKKRVLLGETGK-KLPRYYKNIGLGFKMPKEATKGAYTDKK*PLPGNVSI*G |
Parental | RILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHK-NMSVHLS-PCFRDVQIGDIVTVGECRPLSKTV |
.I.S..V.KMKMQRT.VI..DY.HYIRKYN.FE..H..NMS.H.S.PCFRD.QIGDIVTVGEC.PL.KTV | |
Retrocopy | QIPSDMVIKMKMQRTTVIHQDYTHYIRKYNCFERCHR<NMSLHRS<PCFRDLQIGDIVTVGECQPLHKTV |
Parental | RFNVLKVTKAAGTKKQFQKF |
.FN.L.V.KAA..KKQ.QKF | |
Retrocopy | LFNMLRVSKAASIKKQLQKF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |