RetrogeneDB - Parental gene ENSMPUG00000003816 details

							
>ENSMPUG00000003816
ATGGGGAAGGAAAAGACTCATATCAACATTGTTGTCATCGGACACGTAGATTCGGGCAAGTCTACCACTACTGGTCATCT

GATCTACAAATGTGGTGGGATCGACAAAAGAACTATCGAAAAATTCGAGAAGGAGGCTGCTGAGATGGGAAAAGGCTCCT

TCAAGTATGCCTGGGTCTTGGATAAACTGAAAGCTGAACGTGAACGTGGTATCACCATTGATATCTCCCTGTGGAAATTC

GAGACCAGCAAGTATTACGTGACCATCATTGATGCTCCAGGACACAGAGACTTTATCAAAAACATGATTACAGGCACATC

CCAGGCTGACTGTGCTGTCCTGATTGTTGCTGCTGGTGTTGGTGAATTTGAAGCCGGTATCTCCAAGAACGGGCAGACCC

GTGAGCATGCCCTTCTGGCTTACACACTGGGTGTAAAACAACTAATTGTTGGTGTTAACAAAATGGATTCCACTGAGCCA

CCCTACAGCCAGAAGAGATACGAGGAAATTGTTAAGGAAGTCAGCACCTACATTAAGAAAATTGGCTACAACCCCGACAC

AGTAGCATTTGTGCCAATTTCTGGTTGGAATGGTGACAACATGCTGGAGCCAAGTGCTAATATGCCTTGGTTCAAGGGAT

GGAAAGTCACCCGTAAAGATGGGAATGCCAGTGGAACCACACTGCTTGAAGCTCTGGATTGCATTCTGCCACCAACTCGT

CCAACTGACAAGCCCTTGCGTCTGCCTCTCCAGGATGTCTACAAAATTGGTGGCATTGGTACTGTCCCTGTGGGCCGAGT

GGAGACTGGTGTTCTTAAGCCTGGCATGGTGGTCACTTTTGCTCCAGTCAACGTTACAACTGAAGTCAAGTCTGTTGAAA

TGCATCATGAAGCTTTGAGTGAGGCTCTTCCTGGGGACAATGTGGGCTTCAATGTCAAGAACGTATCTGTCAAAGATGTT

CGTCGTGGCAATGTGGCTGGCGACAGCAAAAATGACCCACCAATGGAAGCAGCTGGCTTCACAGCTCAGGTGATTATCCT

GAACCATCCAGGCCAAATTAGTGCTGGATATGCACCTGTGCTGGATTGTCACACAGCTCACATTGCTTGCAAGTTTGCTG

AGCTGAAGGAGAAGATAGATCGTCGTTCTGGAAAAAAGCTGGAAGAGAATGGGCCC

Species	Parental gene accession	Homology type	Retrogenes number
Bos taurus	ENSBTAG00000014534	ortholog_one2many	3 retrogenes	retro_btau_114, retro_btau_115, retro_btau_192,
Canis familiaris	ENSCAFG00000013249	possible_ortholog	1 retrogene	retro_cfam_1007,
Dipodomys ordii	ENSDORG00000009629	possible_ortholog	1 retrogene	retro_dord_509,
Equus caballus	ENSECAG00000020363	ortholog_one2many	2 retrogenes	retro_ecab_66, retro_ecab_93,
Equus caballus	ENSECAG00000022260	possible_ortholog	1 retrogene	retro_ecab_802,
Erinaceus europaeus	ENSEEUG00000000342	possible_ortholog	3 retrogenes	retro_eeur_407, retro_eeur_492, retro_eeur_625,
Felis catus	ENSFCAG00000030977	ortholog_one2many	14 retrogenes	retro_fcat_1021, retro_fcat_1388, retro_fcat_1569, retro_fcat_1683, retro_fcat_1825, retro_fcat_184, retro_fcat_1915, retro_fcat_220, retro_fcat_221, retro_fcat_334, retro_fcat_515, retro_fcat_566, retro_fcat_688, retro_fcat_737,
Homo sapiens	ENSG00000156508	ortholog_one2many	27 retrogenes	retro_hsap_1093, retro_hsap_1181, retro_hsap_1567, retro_hsap_1671, retro_hsap_190, retro_hsap_2302, retro_hsap_2455, retro_hsap_2637, retro_hsap_2712, retro_hsap_278, retro_hsap_283, retro_hsap_2896, retro_hsap_2920, retro_hsap_2967, retro_hsap_2983, retro_hsap_3239, retro_hsap_3291, retro_hsap_3314, retro_hsap_363, retro_hsap_3701, retro_hsap_3706, retro_hsap_3758, retro_hsap_3825, retro_hsap_3917, retro_hsap_4220, retro_hsap_4730, retro_hsap_989,
Loxodonta africana	ENSLAFG00000028081	possible_ortholog	1 retrogene	retro_lafr_651,
Myotis lucifugus	ENSMLUG00000013537	ortholog_many2many	24 retrogenes	retro_mluc_110, retro_mluc_1252, retro_mluc_1392, retro_mluc_1430, retro_mluc_1558, retro_mluc_1628, retro_mluc_1644, retro_mluc_1853, retro_mluc_1901, retro_mluc_1910, retro_mluc_2071, retro_mluc_2148, retro_mluc_2154, retro_mluc_2277, retro_mluc_2355, retro_mluc_2358, retro_mluc_2359, retro_mluc_2391, retro_mluc_441, retro_mluc_470, retro_mluc_677, retro_mluc_950, retro_mluc_956, retro_mluc_966,
Monodelphis domestica	ENSMODG00000018533	possible_ortholog	4 retrogenes	retro_mdom_1053, retro_mdom_1146, retro_mdom_311, retro_mdom_792,
Mustela putorius furo	ENSMPUG00000004271	within_species_paralog	10 retrogenes	retro_mputfur_1179, retro_mputfur_1276, retro_mputfur_1351, retro_mputfur_1394, retro_mputfur_284, retro_mputfur_355, retro_mputfur_474, retro_mputfur_678, retro_mputfur_920, retro_mputfur_973,
Mustela putorius furo	ENSMPUG00000008289	within_species_paralog	3 retrogenes	retro_mputfur_1030, retro_mputfur_609, retro_mputfur_761,
Mus musculus	ENSMUSG00000037742	possible_ortholog	15 retrogenes	retro_mmus_1349, retro_mmus_1518, retro_mmus_1667, retro_mmus_1783, retro_mmus_1816, retro_mmus_1849, retro_mmus_1850, retro_mmus_1864, retro_mmus_1909, retro_mmus_2363, retro_mmus_2583, retro_mmus_2902, retro_mmus_3249, retro_mmus_480, retro_mmus_483,
Oryctolagus cuniculus	ENSOCUG00000008481	ortholog_one2many	3 retrogenes	retro_ocun_1102, retro_ocun_187, retro_ocun_71,
Ochotona princeps	ENSOPRG00000016685	ortholog_one2many	6 retrogenes	retro_opri_1049, retro_opri_1076, retro_opri_1197, retro_opri_298, retro_opri_325, retro_opri_383,
Sus scrofa	ENSSSCG00000004489	ortholog_one2many	4 retrogenes	retro_sscr_169, retro_sscr_492, retro_sscr_612, retro_sscr_758,
Ictidomys tridecemlineatus	ENSSTOG00000007687	possible_ortholog	4 retrogenes	retro_itri_1509, retro_itri_1740, retro_itri_1816, retro_itri_195,
Tursiops truncatus	ENSTTRG00000000114	ortholog_one2many	19 retrogenes	retro_ttru_1020, retro_ttru_1150, retro_ttru_1196, retro_ttru_1349, retro_ttru_1351, retro_ttru_1368, retro_ttru_1384, retro_ttru_1810, retro_ttru_1861, retro_ttru_1876, retro_ttru_384, retro_ttru_390, retro_ttru_401, retro_ttru_523, retro_ttru_664, retro_ttru_698, retro_ttru_844, retro_ttru_941, retro_ttru_998,
Drosophila melanogaster	FBgn0000557	ortholog_many2many	1 retrogene	retro_dmel_9,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_mputfur_220	95.57	92.09	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_mputfur_502	96.82	56.12	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_mputfur_844	75.61	51.53	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_mputfur_862	77.26	81.63	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_mputfur_1514	65.84	51.02	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_mputfur_1643	74.34	57.40	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSMPUG00000003816 retrocopies

Parental gene:	ENSMPUG00000003816
Aliases:	None
Description:	None
Organism:	*Ferret (Mustela putorius furo)*
Coordinates:	GL896965.1:9787154..9789195(-)

Parental gene:

ENSMPUG00000003816