RetrogeneDB ID: | retro_mputfur_973 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896983.1:137590..138621(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000004271 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.57 % |
Parental protein coverage: | 87.69 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERG |
M.K.K.HINI...GH.D..K....G.LIYKC.GI..RT..KFEKEA.EMGKG.FKY.WVLDKLK.E.E.G | |
Retrocopy | MKKKKAHINIAILGHKDLSKFIPIGDLIYKCDGINRRTTVKFEKEAVEMGKGCFKYDWVLDKLKIECEHG |
Parental | ITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLA |
I.IDISLWKFE.SKY.VTIIDA.GHRDFIKN.ITGTSQA.C.VLI.AA.V.......SKNG.T.EHALLA | |
Retrocopy | INIDISLWKFENSKYDVTIIDASGHRDFIKNVITGTSQAECDVLIAAADVVNLKQ-VSKNGKTCEHALLA |
Parental | YTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPW |
YTL.VKQLI.GVN..DSTEPPYS.KRY.EIVKEVSTYIK.IG.NPDTVA.V.ISGWNGDNMLE...NMPW | |
Retrocopy | YTLDVKQLIIGVNSIDSTEPPYS*KRYKEIVKEVSTYIKTIGCNPDTVASVLISGWNGDNMLETNTNMPW |
Parental | FKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF |
F.GWK...K.GNASGT.LL.AL.CILP.T.P..KPL...L.D.YKIGGIGT..V..VETGVLKP..V.TF | |
Retrocopy | FNGWKFAYKGGNASGTMLLKALNCILPSTHPAEKPLYPLL*DIYKIGGIGTACVV*VETGVLKPSLVFTF |
Parental | APVNVTTEVKSVEMHHEA-LSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNH |
APV...T.VK.VEM.H.A.LSEA..GD....N.KN..VKD...GNV..DSKNDPPMEA.GFTAQVIILNH | |
Retrocopy | APVSAKTVVKCVEMYH*A<LSEAVCGD----NDKNPTVKDIHHGNVVDDSKNDPPMEASGFTAQVIILNH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |