RetrogeneDB ID: | retro_ogar_1197 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873538.1:27224705..27225572(-) | ||
Located in intron of: | ENSOGAG00000007238 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | VDAC1 | ||
Ensembl ID: | ENSOGAG00000030742 | ||
Aliases: | None | ||
Description: | voltage-dependent anion channel 1 [Source:HGNC Symbol;Acc:12669] |
Percent Identity: | 97.92 % |
Parental protein coverage: | 98.63 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | TMSLQKMAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRW |
T.S.QKMAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRW | |
Retrocopy | TASEQKMAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRW |
Parental | TEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIA |
TEYGLTFTEKWNTDNTLGTEITVEDQLAR.LKLTFDSSFSPNTG...AKIKTGYKREHINLGCDVDFDIA | |
Retrocopy | TEYGLTFTEKWNTDNTLGTEITVEDQLARRLKLTFDSSFSPNTGXXXAKIKTGYKREHINLGCDVDFDIA |
Parental | GPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLET |
GPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLET | |
Retrocopy | GPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLET |
Parental | AVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHK |
AVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHK | |
Retrocopy | AVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHK |
Parental | LGLGLEFQA |
LGLGLEFQA | |
Retrocopy | LGLGLEFQA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |