RetrogeneDB ID: | retro_ogar_771 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873527.1:5640816..5641110(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RBM8A | ||
Ensembl ID: | ENSOGAG00000000202 | ||
Aliases: | None | ||
Description: | RNA binding motif protein 8A [Source:HGNC Symbol;Acc:9905] |
Percent Identity: | 58. % |
Parental protein coverage: | 56.5 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMG |
G.IL.VTGVHEEATEED.H.KF.EYG.IKNIHLNLDR..GYLKGY.LVEYETYKE.Q.A..GL....... | |
Retrocopy | G*ILSVTGVHEEATEEDTHKKFTEYGKIKNIHLNLDRQIGYLKGYILVEYETYKEVQPAV*GLKVKPQGW |
Parental | QPISVDWCFVRGPPKGKRRGGRRRSRSPDR |
...SV..........G...G...RS..P.R | |
Retrocopy | DSQSVLTALLFYKRRGDHKGS--RSPDPER |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000016021 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008411 | 1 retrocopy | |
Felis catus | ENSFCAG00000026379 | 1 retrocopy | |
Homo sapiens | ENSG00000131795 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000016058 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000017436 | 2 retrocopies | |
Mus musculus | ENSMUSG00000038374 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000000202 | 2 retrocopies |
retro_ogar_2694, retro_ogar_771 ,
|
Ochotona princeps | ENSOPRG00000013316 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000021215 | 2 retrocopies | |
Sorex araneus | ENSSARG00000013289 | 2 retrocopies | |
Tupaia belangeri | ENSTBEG00000014947 | 2 retrocopies |