RetrogeneDB ID: | retro_opri_1171 | ||
Retrocopylocation | Organism: | Southern American pika (Ochotona princeps) | |
Coordinates: | scaffold_8529:54357..54612(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MAGOHB | ||
Ensembl ID: | ENSOPRG00000000548 | ||
Aliases: | None | ||
Description: | mago-nashi homolog B (Drosophila) [Source:HGNC Symbol;Acc:25504] |
Percent Identity: | 67.78 % |
Parental protein coverage: | 58.11 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MSMASDFYLRYYVGHKGKFGHEFLEFEFRPDG-KLRYANNS-NYKNDVMIRKEAYVHKSVMEEL-KRII- |
.SM.SDFYL..Y.GH..KF..EFLE..F.PDG.K.R...NS.NYKNDVMIRKEAYVH.SVM.EL.KRI.. | |
Retrocopy | ISMDSDFYLCSYAGHESKFRQEFLELKFQPDG<KTRTYANSSNYKNDVMIRKEAYVH-SVMGEL<KRIL< |
Parental | DDSEITKEDDALWPPPDRVG |
.DSEITKED.ALW.PP...G | |
Retrocopy | NDSEITKEDNALWLPPTELG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |