Parental gene:

MAGOHB, ENSOPRG00000000548

Aliases:None
Description:mago-nashi homolog B (Drosophila) [Source:HGNC Symbol;Acc:25504]
Organism:Southern American pika (Ochotona princeps)
Coordinates:scaffold_2603:87747..93705(-)


>ENSOPRG00000000548
ATGTCTATGGCCAGTGATTTCTACCTGCGCTACTACGTCGGGCACAAGGGCAAATTTGGACACGAGTTCCTGGAGTTCGA
GTTTCGGCCAGACGGAAAGCTTAGGTATGCCAACAACAGCAATTACAAAAATGATGTCATGATCAGAAAAGAGGCTTACG
TACACAAGAGTGTGATGGAGGAACTGAAGAGGATTATCGACGACAGTGAAATTACGAAAGAGGATGACGCCTTGTGGCCC
CCGCCCGACAGGGTTGGCCGGCAGGAACTTGAAATTGTAATTGGGGATGAACATATTTCTTTTACAACATCAAAAATAGG
TTCGCTTATTGATGTGAATCAGTCAAAGGACCCTGAAGGCCTGCGAGTATTTTACTATTTGGTACAGGATCTGAAATGTT
TAGTTTTCAGCCTCATTGGATTGCACTTCAAGATTAAGCCAATTTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019235 ortholog_one2one 1 retrogene
retro_btau_399,
Choloepus hoffmanni ENSCHOG00000004382 ortholog_one2one 1 retrogene
retro_chof_1730,
Callithrix jacchus ENSCJAG00000021662 ortholog_one2one 7 retrogenes
retro_cjac_1336, retro_cjac_1840, retro_cjac_1858, retro_cjac_2354, retro_cjac_3234, retro_cjac_3250, retro_cjac_546,
Dasypus novemcinctus ENSDNOG00000005997 ortholog_one2one 4 retrogenes
retro_dnov_140, retro_dnov_347, retro_dnov_423, retro_dnov_891,
Echinops telfairi ENSETEG00000016591 ortholog_one2one 3 retrogenes
retro_etel_1022, retro_etel_1566, retro_etel_2147,
Homo sapiens ENSG00000111196 ortholog_one2one 1 retrogene
retro_hsap_1360,
Macropus eugenii ENSMEUG00000001782 ortholog_one2one 1 retrogene
retro_meug_324,
Myotis lucifugus ENSMLUG00000003527 ortholog_one2one 2 retrogenes
retro_mluc_1039, retro_mluc_2484,
Macaca mulatta ENSMMUG00000005082 ortholog_one2many 1 retrogene
retro_mmul_1246,
Monodelphis domestica ENSMODG00000000462 ortholog_one2one 1 retrogene
retro_mdom_424,
Nomascus leucogenys ENSNLEG00000003355 ortholog_one2one 1 retrogene
retro_nleu_1395,
Ochotona princeps ENSOPRG00000009020 within_species_paralog 1 retrogene
retro_opri_521,
Pan troglodytes ENSPTRG00000004679 ortholog_one2one 2 retrogenes
retro_ptro_1179, retro_ptro_932,
Sus scrofa ENSSSCG00000000635 ortholog_one2one 1 retrogene
retro_sscr_971,
Ictidomys tridecemlineatus ENSSTOG00000000835 ortholog_one2one 1 retrogene
retro_itri_212,
Tupaia belangeri ENSTBEG00000014820 ortholog_one2one 7 retrogenes
retro_tbel_1250, retro_tbel_1393, retro_tbel_210, retro_tbel_2259, retro_tbel_2723, retro_tbel_2878, retro_tbel_451,
Tarsius syrichta ENSTSYG00000010452 ortholog_one2one 7 retrogenes
retro_tsyr_1730, retro_tsyr_1748, retro_tsyr_383, retro_tsyr_658, retro_tsyr_81, retro_tsyr_908, retro_tsyr_966,
Tursiops truncatus ENSTTRG00000001272 ortholog_one2one 2 retrogenes
retro_ttru_515, retro_ttru_647,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_308 87.16 99.32
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2. retro_opri_1171 67.78 58.11
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Download FASTA sequences of all ENSOPRG00000000548 retrocopies