RetrogeneDB ID: | retro_tsyr_1069 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_29576:20280..20700(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTSYG00000013466 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 70.83 % |
Parental protein coverage: | 62.67 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | LVKDMKIKSLEENYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI-GDYNGHV |
LVK.MKIK.LE...LFSL.I...EIID.FLGASLKDEVLKI.P.QKQT.A.Q.TRFKAFVAI.G.YNGH. | |
Retrocopy | LVKGMKIKLLEI-CLFSLSIMKLEIIDLFLGASLKDEVLKIKPEQKQTHADQQTRFKAFVAI>GGYNGHI |
Parental | GLGVKCSKEVATAIRGAIILAKLSIVPVR-RGYWGNKIGKPHNSPCKVTGRCGSVLVRLIPAPR-GTGIV |
.LGVKCSKE.ATA..G.IIL......P.R.RG.WGNKIGKPH..PCKVTG..GS.LV.LIP.PR.GTGI. | |
Retrocopy | SLGVKCSKEIATALQGTIILV-IIYCPCR>RGHWGNKIGKPHSVPCKVTGCSGSLLVHLIPVPR>GTGII |
Parental | SAPV |
SAP. | |
Retrocopy | SAPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |