RetrogeneDB - Parental gene ENSFCAG00000029191 details

                            
>ENSFCAG00000029191
CTGCAGACAGAGCATGGAGTCAGGAGTCAGAGGCCAGAGCCCGGGCGGCGGGGCCGGGGCGGCCGCGCTTGTCGGGGCCT

GGGTTTCACCTCCCCACACCGACGAGTGGGCGGCGGCCGGGGTCGAGGCCGGGGCCGCGGCCGCGGAGCTCGCGGAGGCA

AGGCCGAGGACAAGGAGTGGATGCCCGTCACCAAGCTGGGCCGCCTGGTCAAGGATATGAAGATCAAGTCCCTGGAGGAG

ATCTATCTCTTCTCTCTGCCCATCAAGGAGTCCGAGATCATTGACTTTTTCTTGGGGGCGTCACTCAAGGACGAGGTCTT

GAAGATTATGCCTGTGCAGAAACAGACCCGCGCTGGCCAGCGGACCAGGTTCAAGGCATTTGTTGCCATCGGAGACTACA

ACGGACACGTTGGTCTGGGTGTTAAGTGTTCTAAGGAGGTAGCCACCGCCATCCGTGGGGCCATCATCCTGGCCAAGCTT

TCCATCGTCCCCGTGCGGCGAGGCTACTGGGGGAACAAGATTGGGAAGCCCCACACTGTACCCTGCAAGGTGACAGGCCG

CTGTGGTTCTGTGCTGGTGCGCCTCATTCCTGCCCCCAGAGGCACTGGCATTGTCTCAGCCCCTGTACCTAAGAAGCTAC

TGATGATGGCTGGTATCGATGATTGCTACACCTCAGCTAGGGGCTGCACTGCCACCCTGGGCAACTTCGCCAAGGCCACT

TTTGATGCCATTTCTAAGACCTACAGCTATCTCACCCCTGATCTTTGGAAGGAGACTGTGTTCACCAAGTCTCCCTATCA

GGAATTCACTGACCATCTTGTAAAGACCCACACCAGAGTCTCTGTGCAGAGGACCCAGGCTCCAGCTGTGGCCACCACAT

AG

Library	Parental gene expression (RPM)
SRP017611_brain	283 .83 RPM
SRP017611_kidney	608 .66 RPM
SRP017611_liver	446 .62 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000002549	ortholog_one2many	1 retrogene	retro_acar_57,
Callithrix jacchus	ENSCJAG00000015267	ortholog_one2many	15 retrogenes	retro_cjac_1482, retro_cjac_1585, retro_cjac_1609, retro_cjac_1712, retro_cjac_1964, retro_cjac_2201, retro_cjac_2255, retro_cjac_2284, retro_cjac_2361, retro_cjac_2493, retro_cjac_2620, retro_cjac_274, retro_cjac_317, retro_cjac_3741, retro_cjac_4194,
Homo sapiens	ENSG00000140988	ortholog_one2one	47 retrogenes	retro_hsap_1060, retro_hsap_136, retro_hsap_140, retro_hsap_141, retro_hsap_1443, retro_hsap_1444, retro_hsap_1457, retro_hsap_1463, retro_hsap_148, retro_hsap_1648, retro_hsap_1688, retro_hsap_1722, retro_hsap_1812, retro_hsap_1830, retro_hsap_1831, retro_hsap_1838, retro_hsap_1845, retro_hsap_1897, retro_hsap_1953, retro_hsap_1965, retro_hsap_1971, retro_hsap_2124, retro_hsap_2198, retro_hsap_2424, retro_hsap_244, retro_hsap_2483, retro_hsap_2486, retro_hsap_250, retro_hsap_282, retro_hsap_2871, retro_hsap_3035, retro_hsap_3097, retro_hsap_3106, retro_hsap_3182, retro_hsap_3211, retro_hsap_3369, retro_hsap_3464, retro_hsap_3584, retro_hsap_3779, retro_hsap_385, retro_hsap_4094, retro_hsap_4290, retro_hsap_435, retro_hsap_4811, retro_hsap_754, retro_hsap_761, retro_hsap_970,
Gorilla gorilla	ENSGGOG00000009371	ortholog_one2many	5 retrogenes	retro_ggor_129, retro_ggor_1391, retro_ggor_1428, retro_ggor_168, retro_ggor_390,
Macropus eugenii	ENSMEUG00000004508	possible_ortholog	2 retrogenes	retro_meug_156, retro_meug_2103,
Microcebus murinus	ENSMICG00000012765	possible_ortholog	28 retrogenes	retro_mmur_1192, retro_mmur_1273, retro_mmur_1283, retro_mmur_1296, retro_mmur_1407, retro_mmur_1417, retro_mmur_1440, retro_mmur_153, retro_mmur_1613, retro_mmur_205, retro_mmur_210, retro_mmur_226, retro_mmur_230, retro_mmur_259, retro_mmur_266, retro_mmur_463, retro_mmur_672, retro_mmur_698, retro_mmur_742, retro_mmur_802, retro_mmur_824, retro_mmur_829, retro_mmur_875, retro_mmur_953, retro_mmur_966, retro_mmur_969, retro_mmur_981, retro_mmur_99,
Monodelphis domestica	ENSMODG00000016077	possible_ortholog	1 retrogene	retro_mdom_536,
Otolemur garnettii	ENSOGAG00000010098	ortholog_one2many	19 retrogenes	retro_ogar_1051, retro_ogar_1120, retro_ogar_1205, retro_ogar_1557, retro_ogar_1821, retro_ogar_1835, retro_ogar_1837, retro_ogar_1851, retro_ogar_2101, retro_ogar_2164, retro_ogar_2313, retro_ogar_2648, retro_ogar_2817, retro_ogar_2842, retro_ogar_2965, retro_ogar_3109, retro_ogar_3177, retro_ogar_3180, retro_ogar_794,
Sarcophilus harrisii	ENSSHAG00000015213	possible_ortholog	5 retrogenes	retro_shar_186, retro_shar_288, retro_shar_456, retro_shar_525, retro_shar_783,
Tupaia belangeri	ENSTBEG00000006726	possible_ortholog	30 retrogenes	retro_tbel_1023, retro_tbel_1059, retro_tbel_1105, retro_tbel_1179, retro_tbel_129, retro_tbel_1444, retro_tbel_1545, retro_tbel_1615, retro_tbel_1622, retro_tbel_1786, retro_tbel_1910, retro_tbel_2294, retro_tbel_2749, retro_tbel_2786, retro_tbel_2973, retro_tbel_3179, retro_tbel_3314, retro_tbel_3509, retro_tbel_3523, retro_tbel_3682, retro_tbel_3701, retro_tbel_392, retro_tbel_4373, retro_tbel_463, retro_tbel_4674, retro_tbel_481, retro_tbel_586, retro_tbel_603, retro_tbel_639, retro_tbel_647,
Tarsius syrichta	ENSTSYG00000013466	ortholog_one2one	52 retrogenes	retro_tsyr_1069, retro_tsyr_1078, retro_tsyr_1147, retro_tsyr_1301, retro_tsyr_131, retro_tsyr_1317, retro_tsyr_1466, retro_tsyr_1478, retro_tsyr_1498, retro_tsyr_1505, retro_tsyr_1509, retro_tsyr_1536, retro_tsyr_1564, retro_tsyr_1568, retro_tsyr_1588, retro_tsyr_1614, retro_tsyr_1636, retro_tsyr_1658, retro_tsyr_169, retro_tsyr_1789, retro_tsyr_1804, retro_tsyr_1827, retro_tsyr_186, retro_tsyr_1929, retro_tsyr_1935, retro_tsyr_2016, retro_tsyr_2175, retro_tsyr_290, retro_tsyr_349, retro_tsyr_415, retro_tsyr_417, retro_tsyr_463, retro_tsyr_472, retro_tsyr_525, retro_tsyr_527, retro_tsyr_545, retro_tsyr_568, retro_tsyr_604, retro_tsyr_605, retro_tsyr_609, retro_tsyr_61, retro_tsyr_622, retro_tsyr_638, retro_tsyr_650, retro_tsyr_672, retro_tsyr_689, retro_tsyr_691, retro_tsyr_699, retro_tsyr_768, retro_tsyr_773, retro_tsyr_922, retro_tsyr_980,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_fcat_517	66.23	50.17	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_fcat_1245	63.48	59.04	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_fcat_1328	83.01	51.88	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_fcat_1606	68.63	85.67	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_fcat_1610	66.00	66.89	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_fcat_1737	77.73	73.38	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSFCAG00000029191 retrocopies

Parental gene:	RPS2, ENSFCAG00000029191
Aliases:	None
Description:	ribosomal protein S2 [Source:HGNC Symbol;Acc:10404]
Organism:	*Cat (Felis catus)*
Coordinates:	E3:41388882..41391257(+)

Parental gene:

RPS2, ENSFCAG00000029191