RetrogeneDB ID: | retro_tsyr_702 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_174817:4066..4454(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN4 | ||
Ensembl ID: | ENSTSYG00000008974 | ||
Aliases: | None | ||
Description: | prefoldin subunit 4 [Source:HGNC Symbol;Acc:8868] |
Percent Identity: | 77.04 % |
Parental protein coverage: | 99.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEE-IEVKKKQLQNLEDACDDIMLADDDCLMIPY |
MAAT.KKAAA.DVNVTFEDQQ.IN.FA.NTSRIT.LKEE.I.VKKKQLQ.LEDA.DDIMLAD..CLMIPY | |
Retrocopy | MAATLKKAAA-DVNVTFEDQQNINTFAQNTSRITKLKEE<IQVKKKQLQSLEDAGDDIMLAD--CLMIPY |
Parental | QIGDVFISHSQEETQEM-LEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEADE |
QIG.VFI.HSQEETQEM........LQEEID.LESRVESIQ.VL..LKVQ.YAKF.SNIN...DE | |
Retrocopy | QIGNVFIRHSQEETQEM<VXXXXXXLQEEIDPLESRVESIQWVLPVLKVQFYAKFDSNINFQVDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |