Parental gene: | PFDN4, ENSOCUG00000004940 |
| Aliases: | None |
| Description: | prefoldin subunit 4 [Source:HGNC Symbol;Acc:8868] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018712:2294725..2305945(-) |
>ENSOCUG00000004940
ATGGCGGCCACCATGAAGAAGGCGGCTGCAGAAGATGTCAATGTTACTTTTGAAGATCAACAAAAGATAAACAAATTTGC
AAGGAATACGAGTAGAATCACAGAGCTAAAGGAAGAAATAGAAGTAAAAAAGAAACAACTCCAAAATTTAGAAGATGCCT
GTGACGACATCATGCTTGCAGAAGATGACTGCTTGATGATTCCTTATCAGATCGGTGACGTTTTCATCAGCCACTCACAA
GAAGAAACACAGGAAATGTTAGAAGAGGCAAAGAAAAATTTGCAAGAAGAAATTGACGCCTTAGAATCCAGAGTGGAATC
CATTCAACGAGTGTTAGCAGATTTGAAAGTTCAGTTATATGCAAAATTTGGGAGCAACATAAACCTTGAAGCTGATGAAA
GTTAA
ATGGCGGCCACCATGAAGAAGGCGGCTGCAGAAGATGTCAATGTTACTTTTGAAGATCAACAAAAGATAAACAAATTTGC
AAGGAATACGAGTAGAATCACAGAGCTAAAGGAAGAAATAGAAGTAAAAAAGAAACAACTCCAAAATTTAGAAGATGCCT
GTGACGACATCATGCTTGCAGAAGATGACTGCTTGATGATTCCTTATCAGATCGGTGACGTTTTCATCAGCCACTCACAA
GAAGAAACACAGGAAATGTTAGAAGAGGCAAAGAAAAATTTGCAAGAAGAAATTGACGCCTTAGAATCCAGAGTGGAATC
CATTCAACGAGTGTTAGCAGATTTGAAAGTTCAGTTATATGCAAAATTTGGGAGCAACATAAACCTTGAAGCTGATGAAA
GTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .39 RPM |
| SRP017611_kidney | 7 .30 RPM |
| SRP017611_brain | 9 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013164 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000008812 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000011856 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002615 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000012478 | ortholog_one2one | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000002733 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000013355 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000101132 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027337 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000008582 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000017300 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000006173 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000052033 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007023 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016375 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005385 | ortholog_one2one | 5 retrogenes | |
| Oryzias latipes | ENSORLG00000019179 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025840 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013641 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007487 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000028253 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000008974 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003850 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_287 | 89.39 | 98.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_344 | 87.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1210 | 69.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ocun_1432 | 76.69 | 98.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ocun_1525 | 69.00 | 73.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000004940 retrocopies