RetrogeneDB ID: | retro_ttru_1029 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_100454:57982..58311(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RAC2 | ||
Ensembl ID: | ENSTTRG00000001099 | ||
Aliases: | None | ||
Description: | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) [Source:HGNC Symbol;Acc:9802] |
Percent Identity: | 61.95 % |
Parental protein coverage: | 57.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | QAIKCVVVGD-GAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLW-DTAGQEDYDRLRP |
.A.KCV.VG..GA.GKTCLLISYTT.AFPGEYIPT.FDN.S..V..D.K.VNLGLW.D.AGQE..DRL.P | |
Retrocopy | EAVKCVEVGG>GAAGKTCLLISYTTSAFPGEYIPTLFDNDSGKVIADGKLVNLGLW<DIAGQEYDDRLCP |
Parental | LSYPQTDVFLIC-FSLVSPASYENVRAKWFPEVRHHCPSTPII |
LSY....VFL...F.L.S.AS.....AKW.P.V......TPII | |
Retrocopy | LSYL*INVFLVT<FCLMSLASFTDICAKWYPKVQPQDTNTPII |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |